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OPENSEQ.org

PTFC2 - PTMA
UniProt: P32672 - P69824
Length: 506
Sequences: 549
Seq/Len: 1.16
I_Prob: 0.00

PTFC2 - Fructose-like permease IIC component 2
Paralog alert: 0.60 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: HRSA PTFBC PTFC1 PTFC2 PTFLB
PTMA - Mannitol-specific cryptic phosphotransferase enzyme IIA component
Paralog alert: 0.73 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: PTFA PTKA PTMA PTSN SGCA ULAC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
329_V 22_Q 1.13 0.00
96_G 88_V 1.03 0.00
227_P 114_A 0.95 0.00
140_I 142_D 0.90 0.00
35_V 14_V 0.86 0.00
25_F 120_E 0.85 0.00
78_Y 44_Q 0.84 0.00
236_I 23_E 0.80 0.00
108_I 133_T 0.80 0.00
183_I 12_I 0.80 0.00
69_V 56_Y 0.80 0.00
11_T 44_Q 0.79 0.00
116_V 136_S 0.79 0.00
117_V 43_I 0.77 0.00
179_M 138_K 0.77 0.00
236_I 130_Q 0.77 0.00
231_G 114_A 0.77 0.00
172_M 130_Q 0.76 0.00
308_P 81_L 0.75 0.00
179_M 129_E 0.75 0.00
321_A 51_I 0.75 0.00
196_V 138_K 0.74 0.00
238_R 34_D 0.74 0.00
325_V 44_Q 0.74 0.00
206_I 42_Y 0.73 0.00
330_C 100_L 0.73 0.00
171_G 7_F 0.73 0.00
108_I 141_A 0.73 0.00
196_V 39_S 0.72 0.00
123_I 126_E 0.72 0.00
64_G 128_L 0.72 0.00
17_T 21_W 0.71 0.00
78_Y 25_I 0.71 0.00
83_R 109_D 0.71 0.00
79_S 68_A 0.71 0.00
326_V 101_I 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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