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OPENSEQ.org

GPH - SYW
UniProt: P32662 - P00954
Length: 586
Sequences: 350
Seq/Len: 0.62
I_Prob: 0.00

GPH - Phosphoglycolate phosphatase
Paralog alert: 0.89 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG
SYW - Tryptophan--tRNA ligase
Paralog alert: 0.88 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: SYW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
200_A 260_E 1.15 0.00
118_D 207_I 1.10 0.00
114_P 259_P 0.99 0.00
225_P 18_I 0.96 0.00
197_I 281_V 0.94 0.00
197_I 327_A 0.94 0.00
37_E 75_E 0.88 0.00
157_V 94_A 0.87 0.00
174_L 243_V 0.84 0.00
116_V 302_L 0.84 0.00
168_P 31_M 0.83 0.00
173_L 33_D 0.83 0.00
234_D 283_G 0.82 0.00
21_S 212_D 0.82 0.00
118_D 37_C 0.81 0.00
28_A 31_M 0.80 0.00
182_I 25_L 0.80 0.00
200_A 33_D 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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