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OPENSEQ.org

PTFLB - YIHV
UniProt: P32154 - P32143
Length: 781
Sequences: 559
Seq/Len: 0.74
I_Prob: 0.00

PTFLB - Fructose-like PTS system EIIBC component
Paralog alert: 0.49 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: HRSA PTFBC PTFC1 PTFC2 PTFLB
YIHV - Uncharacterized sugar kinase YihV
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
236_L 167_D 1.36 0.00
191_I 119_A 1.22 0.00
195_Y 291_R 1.22 0.00
292_L 134_L 1.18 0.00
90_S 105_R 1.11 0.00
263_M 247_H 1.08 0.00
382_V 139_W 1.06 0.00
281_I 222_E 1.04 0.00
309_F 158_V 1.03 0.00
188_M 11_V 0.99 0.00
299_I 263_S 0.99 0.00
418_I 135_A 0.97 0.00
272_V 18_V 0.97 0.00
140_L 14_R 0.96 0.00
129_M 59_G 0.95 0.00
288_L 195_A 0.92 0.00
319_M 21_L 0.92 0.00
388_T 86_R 0.91 0.00
356_A 218_C 0.91 0.00
65_L 100_D 0.90 0.00
363_I 119_A 0.90 0.00
177_V 98_M 0.90 0.00
235_V 187_R 0.89 0.00
355_V 119_A 0.88 0.00
305_F 231_A 0.86 0.00
131_H 247_H 0.86 0.00
49_E 187_R 0.86 0.00
191_I 124_E 0.86 0.00
234_V 187_R 0.86 0.00
188_M 51_L 0.85 0.00
323_I 108_I 0.85 0.00
252_L 135_A 0.85 0.00
365_P 122_L 0.85 0.00
455_L 288_D 0.84 0.00
63_V 146_A 0.84 0.00
190_P 284_I 0.84 0.00
152_L 220_W 0.84 0.00
195_Y 99_V 0.84 0.00
457_I 273_L 0.83 0.00
359_L 106_I 0.83 0.00
211_L 221_L 0.83 0.00
408_L 128_S 0.82 0.00
96_I 147_F 0.82 0.00
303_M 62_G 0.82 0.00
26_A 147_F 0.82 0.00
262_S 267_A 0.82 0.00
83_K 156_M 0.82 0.00
31_A 218_C 0.82 0.00
21_Y 268_S 0.81 0.00
50_N 177_H 0.81 0.00
131_H 11_V 0.81 0.00
247_F 123_E 0.81 0.00
350_A 109_N 0.81 0.00
194_A 112_S 0.81 0.00
361_T 138_R 0.81 0.00
43_Q 239_T 0.81 0.00
317_F 86_R 0.80 0.00
286_S 108_I 0.80 0.00
435_L 271_A 0.80 0.00
258_P 273_L 0.80 0.00
323_I 267_A 0.80 0.00
76_R 239_T 0.80 0.00
144_I 12_M 0.80 0.00
319_M 183_P 0.80 0.00
457_I 135_A 0.80 0.00
52_L 252_V 0.79 0.00
157_V 79_V 0.79 0.00
446_Y 118_D 0.79 0.00
386_V 109_N 0.79 0.00
216_A 175_S 0.79 0.00
343_Y 112_S 0.79 0.00
263_M 97_I 0.78 0.00
329_F 167_D 0.78 0.00
376_A 138_R 0.78 0.00
431_I 259_D 0.78 0.00
256_L 16_Y 0.78 0.00
25_E 51_L 0.78 0.00
313_A 224_G 0.78 0.00
345_I 240_T 0.78 0.00
387_A 12_M 0.77 0.00
415_V 240_T 0.77 0.00
89_I 198_L 0.77 0.00
400_L 255_A 0.77 0.00
195_Y 223_N 0.77 0.00
235_V 32_N 0.77 0.00
216_A 16_Y 0.76 0.00
153_A 252_V 0.76 0.00
26_A 194_M 0.76 0.00
43_Q 105_R 0.76 0.00
431_I 247_H 0.76 0.00
323_I 48_A 0.75 0.00
239_A 118_D 0.75 0.00
445_F 252_V 0.75 0.00
228_A 103_G 0.75 0.00
242_Y 247_H 0.75 0.00
144_I 281_R 0.75 0.00
145_G 214_G 0.74 0.00
323_I 222_E 0.74 0.00
333_S 272_A 0.74 0.00
93_L 172_V 0.74 0.00
358_G 273_L 0.74 0.00
414_G 249_A 0.74 0.00
227_G 21_L 0.74 0.00
453_L 96_A 0.74 0.00
413_T 252_V 0.74 0.00
435_L 11_V 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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