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OPENSEQ.org

NUOF - NUOK
UniProt: P31979 - P0AFE4
Length: 545
Sequences: 457
Seq/Len: 0.88
I_Prob: 0.01

NUOF - NADH-quinone oxidoreductase subunit F
Paralog alert: 0.48 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUOF
NUOK - NADH-quinone oxidoreductase subunit K
Paralog alert: 0.08 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUOK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
112_L 28_L 1.49 0.01
412_I 96_S 1.11 0.00
132_L 98_M 1.09 0.00
169_L 63_I 1.05 0.00
129_Y 67_S 1.04 0.00
313_S 34_G 1.03 0.00
135_E 33_I 1.02 0.00
274_L 75_I 1.01 0.00
410_S 47_V 0.98 0.00
232_G 41_A 0.97 0.00
94_M 42_S 0.96 0.00
378_P 84_H 0.95 0.00
199_S 62_Y 0.94 0.00
45_L 96_S 0.94 0.00
27_D 38_M 0.94 0.00
119_S 84_H 0.93 0.00
78_K 34_G 0.93 0.00
112_L 26_R 0.93 0.00
237_Q 41_A 0.92 0.00
221_T 14_L 0.92 0.00
223_C 29_L 0.91 0.00
219_V 18_G 0.91 0.00
150_A 83_L 0.91 0.00
379_G 89_N 0.90 0.00
143_L 18_G 0.88 0.00
54_V 41_A 0.87 0.00
130_I 85_R 0.86 0.00
405_V 65_A 0.86 0.00
274_L 12_A 0.85 0.00
85_R 8_L 0.85 0.00
206_T 52_Y 0.83 0.00
400_H 84_H 0.83 0.00
108_L 31_M 0.83 0.00
266_F 46_F 0.83 0.00
52_N 13_I 0.83 0.00
200_K 3_P 0.82 0.00
281_M 60_V 0.82 0.00
27_D 73_A 0.82 0.00
56_D 100_G 0.82 0.00
177_R 49_A 0.81 0.00
122_A 18_G 0.81 0.00
265_P 10_L 0.81 0.00
229_L 28_L 0.81 0.00
48_D 47_V 0.80 0.00
49_E 34_G 0.79 0.00
368_L 17_L 0.79 0.00
128_G 76_G 0.79 0.00
36_E 20_T 0.79 0.00
57_A 98_M 0.79 0.00
49_E 12_A 0.79 0.00
118_I 76_G 0.78 0.00
258_N 60_V 0.78 0.00
14_T 61_M 0.78 0.00
125_A 21_G 0.78 0.00
131_F 37_I 0.78 0.00
274_L 80_L 0.78 0.00
30_R 13_I 0.78 0.00
242_S 30_F 0.78 0.00
78_K 47_V 0.77 0.00
184_T 32_L 0.77 0.00
328_A 80_L 0.77 0.00
169_L 97_E 0.77 0.00
249_L 20_T 0.77 0.00
335_M 75_I 0.76 0.00
381_I 83_L 0.76 0.00
421_A 89_N 0.75 0.00
370_A 68_L 0.75 0.00
423_I 48_V 0.75 0.00
163_T 16_V 0.75 0.00
238_N 16_V 0.75 0.00
35_Y 83_L 0.75 0.00
424_K 89_N 0.75 0.00
168_E 80_L 0.74 0.00
147_I 20_T 0.74 0.00
422_G 98_M 0.74 0.00
136_Y 30_F 0.74 0.00
179_I 85_R 0.74 0.00
27_D 20_T 0.74 0.00
164_G 87_R 0.74 0.00
414_Y 59_Q 0.74 0.00
307_L 98_M 0.73 0.00
187_I 63_I 0.73 0.00
8_P 41_A 0.73 0.00
37_G 46_F 0.73 0.00
117_L 98_M 0.73 0.00
334_N 98_M 0.73 0.00
236_Y 79_L 0.73 0.00
118_I 13_I 0.73 0.00
229_L 94_S 0.72 0.00
50_I 75_I 0.72 0.00
56_D 5_Q 0.72 0.00
194_R 23_V 0.72 0.00
23_P 89_N 0.72 0.00
230_A 20_T 0.72 0.00
334_N 46_F 0.71 0.00
248_K 100_G 0.71 0.00
140_A 16_V 0.71 0.00
54_V 28_L 0.71 0.00
187_I 46_F 0.71 0.00
57_A 12_A 0.71 0.00
50_I 59_Q 0.71 0.00
24_V 89_N 0.71 0.00
150_A 11_A 0.71 0.00
91_A 44_L 0.71 0.00
46_S 20_T 0.71 0.00
382_E 99_R 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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