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OPENSEQ.org
MOAD - MOAE
UniProt: P30748 - P30749
Length: 231
Sequences: 575
Seq/Len: 2.53
I_Prob: 0.96
MOAD - Molybdopterin synthase sulfur carrier subunit
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: MOAD 		MOAE - Molybdopterin synthase catalytic subunit
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: MOAE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1fm0E:DContact Map
2q5wE:DContact Map
3rpfAB:CDContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_R 53_E 1.90 0.96
58_T 61_K 1.31 0.70
79_T 124_F 1.25 0.65
79_T 54_H 1.21 0.61
71_E 118_L 1.17 0.57
57_Q 118_L 1.08 0.47
73_A 55_Y 1.06 0.45
66_L 107_A 1.05 0.44
20_E 142_S 1.03 0.41
68_D 111_G 1.00 0.37
73_A 128_E 0.98 0.36
54_A 55_Y 0.97 0.35
54_A 58_M 0.97 0.34
56_N 120_T 0.96 0.34
79_T 122_A 0.96 0.33
32_R 31_V 0.95 0.32
66_L 68_D 0.95 0.32
19_T 138_E 0.93 0.30
29_E 68_D 0.92 0.29
69_G 99_V 0.91 0.28
18_A 148_K 0.90 0.28
75_F 94_I 0.90 0.27
75_F 58_M 0.88 0.25
59_L 62_A 0.87 0.24
8_A 88_L 0.86 0.24
31_L 48_N 0.85 0.23
8_A 84_R 0.85 0.23
56_N 95_V 0.84 0.21
9_Q 47_V 0.84 0.21
11_R 133_G 0.84 0.21
12_E 127_R 0.83 0.21
78_V 59_T 0.83 0.21
57_Q 61_K 0.82 0.20
79_T 52_L 0.82 0.20
2_I 74_W 0.82 0.20
78_V 115_M 0.81 0.19
49_G 61_K 0.81 0.19
54_A 128_E 0.81 0.19
54_A 123_P 0.81 0.19
71_E 55_Y 0.80 0.18
42_W 63_L 0.80 0.18
5_L 50_L 0.80 0.18
8_A 92_D 0.80 0.18
4_V 66_I 0.79 0.18
32_R 37_K 0.79 0.17
79_T 58_M 0.78 0.17
60_V 14_S 0.78 0.16
4_V 64_A 0.78 0.16
73_A 58_M 0.77 0.16
66_L 110_A 0.77 0.16
62_F 127_R 0.77 0.16
59_L 59_T 0.76 0.15
78_V 85_I 0.76 0.15
53_A 105_S 0.75 0.15
78_V 22_L 0.75 0.15
79_T 42_N 0.75 0.15
2_I 75_P 0.75 0.14
66_L 109_E 0.73 0.14
20_E 144_Q 0.73 0.13
40_D 21_W 0.73 0.13
18_A 145_Q 0.73 0.13
66_L 6_I 0.72 0.13
3_K 27_E 0.72 0.13
59_L 130_T 0.72 0.12
32_R 99_V 0.72 0.12
27_T 144_Q 0.71 0.12
67_T 24_E 0.71 0.12
71_E 122_A 0.71 0.12
33_Q 79_V 0.70 0.12
24_D 64_A 0.70 0.12
26_P 100_T 0.70 0.12
18_A 132_E 0.70 0.12
58_T 65_E 0.70 0.11
51_L 37_K 0.70 0.11
10_V 92_D 0.69 0.11
30_A 9_G 0.69 0.11
57_Q 55_Y 0.69 0.11
79_T 94_I 0.69 0.11
35_M 56_P 0.69 0.11
79_T 56_P 0.69 0.11
70_D 147_A 0.69 0.11
10_V 37_K 0.68 0.10
2_I 38_V 0.68 0.10
75_F 53_E 0.68 0.10
78_V 142_S 0.68 0.10
18_A 144_Q 0.68 0.10
57_Q 57_G 0.68 0.10
53_A 25_R 0.68 0.10
70_D 66_I 0.68 0.10
43_A 139_A 0.67 0.10
76_P 127_R 0.67 0.10
52_L 59_T 0.67 0.10
38_Q 68_D 0.67 0.10
10_V 23_A 0.67 0.10
5_L 55_Y 0.67 0.10
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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