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OPENSEQ.org

PSUK - YEJB
UniProt: P30235 - P0AFU0
Length: 677
Sequences: 578
Seq/Len: 0.92
I_Prob: 0.00

PSUK - Pseudouridine kinase
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
YEJB - Inner membrane ABC transporter permease protein YejB
Paralog alert: 0.79 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
57_A 308_M 1.14 0.00
260_A 29_I 0.94 0.00
7_V 134_P 0.85 0.00
262_L 359_I 0.84 0.00
178_L 89_I 0.84 0.00
226_G 346_I 0.84 0.00
74_T 283_M 0.83 0.00
60_L 234_A 0.80 0.00
213_H 302_S 0.79 0.00
266_W 298_F 0.77 0.00
277_R 164_S 0.77 0.00
76_T 26_I 0.76 0.00
80_G 108_W 0.74 0.00
270_M 150_V 0.74 0.00
271_P 115_F 0.74 0.00
260_A 82_D 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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