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OPENSEQ.org

YIDC - YIDD
UniProt: P25714 - P0A8C8
Length: 633
Sequences: 387
Seq/Len: 0.63
I_Prob: 0.00

YIDC - Membrane protein insertase YidC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YIDC
YIDD - Putative membrane protein insertion efficiency factor
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YIDD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
262_T 52_K 1.27 0.00
401_K 59_K 1.17 0.00
75_R 52_K 1.17 0.00
505_F 23_I 1.14 0.00
459_S 52_K 1.10 0.00
218_F 10_R 1.09 0.00
421_G 70_G 1.07 0.00
135_K 16_I 1.07 0.00
391_Q 21_R 1.06 0.00
325_D 59_K 1.06 0.00
165_F 33_F 1.05 0.00
239_A 36_T 1.04 0.00
500_V 14_A 1.04 0.00
85_P 36_T 1.03 0.00
378_T 67_L 1.03 0.00
389_K 36_T 1.02 0.00
466_I 58_V 1.01 0.00
83_L 36_T 1.01 0.00
517_Y 46_R 1.00 0.00
371_P 43_E 1.00 0.00
411_L 61_V 1.00 0.00
459_S 62_L 0.99 0.00
369_M 61_V 0.99 0.00
393_M 54_S 0.99 0.00
361_I 67_L 0.98 0.00
85_P 20_Q 0.98 0.00
306_T 61_V 0.98 0.00
420_L 15_L 0.98 0.00
220_G 28_G 0.98 0.00
174_V 11_V 0.97 0.00
99_L 36_T 0.96 0.00
181_Q 11_V 0.96 0.00
176_V 43_E 0.95 0.00
253_V 67_L 0.95 0.00
10_I 61_V 0.95 0.00
482_S 67_L 0.94 0.00
532_Y 59_K 0.93 0.00
416_K 65_H 0.93 0.00
76_G 33_F 0.93 0.00
413_K 43_E 0.92 0.00
434_L 48_F 0.92 0.00
392_A 57_T 0.92 0.00
365_V 20_Q 0.91 0.00
269_D 14_A 0.91 0.00
393_M 59_K 0.91 0.00
242_E 79_P 0.91 0.00
152_T 63_K 0.91 0.00
395_E 17_R 0.90 0.00
372_L 19_Y 0.90 0.00
494_I 9_S 0.90 0.00
200_I 63_K 0.89 0.00
183_A 18_V 0.89 0.00
73_N 61_V 0.89 0.00
327_T 29_P 0.88 0.00
238_I 28_G 0.88 0.00
399_D 16_I 0.88 0.00
501_I 15_L 0.88 0.00
237_T 51_I 0.88 0.00
4_Q 22_L 0.88 0.00
441_M 36_T 0.87 0.00
31_P 14_A 0.87 0.00
180_V 45_L 0.87 0.00
376_Q 24_S 0.87 0.00
511_S 23_I 0.86 0.00
519_V 26_L 0.86 0.00
404_I 17_R 0.86 0.00
366_R 42_I 0.86 0.00
363_F 13_I 0.86 0.00
505_F 28_G 0.85 0.00
531_I 19_Y 0.85 0.00
269_D 43_E 0.85 0.00
364_I 33_F 0.84 0.00
118_D 36_T 0.84 0.00
23_W 28_G 0.84 0.00
257_Q 12_L 0.84 0.00
292_P 51_I 0.84 0.00
420_L 72_D 0.84 0.00
270_G 36_T 0.83 0.00
338_Q 36_T 0.83 0.00
308_W 27_L 0.83 0.00
295_V 13_I 0.83 0.00
272_N 36_T 0.82 0.00
376_Q 25_P 0.82 0.00
524_T 36_T 0.82 0.00
451_F 62_L 0.82 0.00
531_I 28_G 0.81 0.00
238_I 29_P 0.81 0.00
69_D 36_T 0.81 0.00
118_D 27_L 0.81 0.00
387_Q 61_V 0.81 0.00
186_K 68_H 0.80 0.00
386_L 28_G 0.80 0.00
79_V 50_V 0.80 0.00
238_I 18_V 0.80 0.00
169_R 11_V 0.80 0.00
474_T 16_I 0.80 0.00
405_S 52_K 0.80 0.00
302_A 61_V 0.80 0.00
144_Q 52_K 0.79 0.00
92_N 43_E 0.79 0.00
88_P 16_I 0.79 0.00
370_Y 52_K 0.79 0.00
48_A 51_I 0.78 0.00
511_S 30_H 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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