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OPENSEQ.org

FMT - YCIO
UniProt: P23882 - P0AFR4
Length: 521
Sequences: 298
Seq/Len: 0.60
I_Prob: 0.00

FMT - Methionyl-tRNA formyltransferase
Paralog alert: 0.28 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FMT PUR3
YCIO - Uncharacterized protein YciO
Paralog alert: 0.53 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RIMN YCIO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
237_S 78_Y 1.39 0.00
184_L 165_E 1.32 0.00
30_V 140_M 1.31 0.00
277_T 38_Y 1.31 0.00
197_Q 120_G 1.30 0.00
190_G 29_V 1.29 0.00
236_M 40_L 1.23 0.00
127_S 156_D 1.20 0.00
127_S 190_D 1.16 0.00
266_L 166_K 1.13 0.00
251_A 114_E 1.12 0.00
128_L 23_I 1.11 0.00
273_I 58_Q 1.11 0.00
32_G 159_E 1.11 0.00
87_V 105_K 1.11 0.00
237_S 121_M 1.10 0.00
277_T 75_L 1.09 0.00
275_V 140_M 1.09 0.00
162_E 89_M 1.08 0.00
138_T 50_M 1.08 0.00
17_A 139_P 1.04 0.00
303_S 85_A 1.04 0.00
175_L 61_D 1.03 0.00
3_E 89_M 1.03 0.00
220_S 119_I 1.02 0.00
188_A 162_D 1.01 0.00
161_A 172_I 1.01 0.00
31_V 143_T 1.00 0.00
284_L 130_Q 0.99 0.00
200_T 164_L 0.99 0.00
110_V 120_G 0.98 0.00
192_A 24_V 0.98 0.00
70_R 104_T 0.97 0.00
6_R 128_I 0.97 0.00
264_T 187_L 0.97 0.00
301_L 24_V 0.96 0.00
61_L 172_I 0.94 0.00
128_L 24_V 0.94 0.00
67_V 21_V 0.92 0.00
289_P 100_I 0.92 0.00
182_T 151_E 0.91 0.00
184_L 153_T 0.91 0.00
40_P 36_S 0.91 0.00
87_V 77_T 0.91 0.00
153_Y 89_M 0.91 0.00
305_R 89_M 0.91 0.00
284_L 171_I 0.90 0.00
230_A 74_E 0.90 0.00
197_Q 29_V 0.90 0.00
128_L 188_T 0.90 0.00
241_I 79_S 0.90 0.00
301_L 100_I 0.90 0.00
239_L 38_Y 0.90 0.00
61_L 170_L 0.90 0.00
49_P 103_G 0.90 0.00
171_K 155_S 0.89 0.00
269_N 72_L 0.89 0.00
137_V 53_I 0.89 0.00
61_L 83_N 0.89 0.00
194_P 157_P 0.89 0.00
169_Y 138_E 0.88 0.00
277_T 78_Y 0.88 0.00
294_A 129_A 0.88 0.00
297_A 172_I 0.87 0.00
284_L 67_L 0.87 0.00
194_P 73_S 0.87 0.00
305_R 119_I 0.87 0.00
224_L 125_S 0.87 0.00
227_C 138_E 0.87 0.00
78_V 100_I 0.87 0.00
81_L 126_N 0.86 0.00
243_G 118_T 0.86 0.00
284_L 58_Q 0.86 0.00
117_R 103_G 0.86 0.00
61_L 136_L 0.85 0.00
199_E 105_K 0.85 0.00
277_T 163_R 0.85 0.00
292_K 147_L 0.85 0.00
10_A 54_C 0.85 0.00
284_L 101_L 0.85 0.00
282_L 143_T 0.85 0.00
289_P 107_V 0.84 0.00
227_C 38_Y 0.84 0.00
144_V 40_L 0.84 0.00
45_K 40_L 0.83 0.00
181_I 17_I 0.83 0.00
208_L 41_G 0.83 0.00
292_K 79_S 0.83 0.00
110_V 77_T 0.83 0.00
78_V 194_V 0.83 0.00
184_L 77_T 0.83 0.00
236_M 99_F 0.83 0.00
238_W 124_P 0.83 0.00
75_Q 36_S 0.83 0.00
211_E 183_T 0.82 0.00
46_K 182_T 0.82 0.00
71_P 169_D 0.82 0.00
71_P 97_Y 0.82 0.00
48_M 101_L 0.82 0.00
51_P 85_A 0.82 0.00
276_A 20_A 0.82 0.00
184_L 31_V 0.82 0.00
189_D 150_S 0.82 0.00
284_L 17_I 0.82 0.00
60_G 48_N 0.82 0.00
208_L 75_L 0.81 0.00
110_V 74_E 0.81 0.00
97_K 168_V 0.81 0.00
242_E 171_I 0.81 0.00
217_W 50_M 0.81 0.00
188_A 195_V 0.81 0.00
41_A 102_K 0.81 0.00
228_I 119_I 0.81 0.00
5_L 56_I 0.81 0.00
187_L 78_Y 0.80 0.00
236_M 68_M 0.80 0.00
299_D 139_P 0.80 0.00
87_V 171_I 0.80 0.00
14_D 37_G 0.80 0.00
77_L 109_R 0.80 0.00
18_R 140_M 0.80 0.00
215_I 40_L 0.80 0.00
286_S 52_R 0.80 0.00
175_L 118_T 0.80 0.00
228_I 195_V 0.80 0.00
145_G 37_G 0.79 0.00
137_V 25_R 0.79 0.00
245_P 68_M 0.79 0.00
239_L 172_I 0.79 0.00
6_R 70_R 0.79 0.00
94_I 190_D 0.79 0.00
276_A 132_L 0.79 0.00
237_S 163_R 0.79 0.00
129_W 38_Y 0.79 0.00
61_L 167_Q 0.79 0.00
310_P 46_D 0.79 0.00
127_S 48_N 0.78 0.00
77_L 195_V 0.78 0.00
186_Q 165_E 0.78 0.00
58_E 131_A 0.78 0.00
14_D 100_I 0.78 0.00
89_V 133_L 0.78 0.00
305_R 113_Q 0.78 0.00
54_V 26_K 0.77 0.00
97_K 65_F 0.77 0.00
151_M 186_D 0.77 0.00
300_L 97_Y 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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