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OPENSEQ.org
LIVF - LIVH
UniProt: P22731 - P0AEX7
Length: 545
Sequences: 10174
Seq/Len: 19.38
I_Prob: 0.80
LIVF - High-affinity branched-chain amino acid transport ATP-binding protein LivF
Paralog alert: 0.94 [within 20: 0.82] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC 		LIVH - High-affinity branched-chain amino acid transport system permease protein LivH
Paralog alert: 0.93 [within 20: 0.67] - ratio of genomes with paralogs
Cluster includes: ALSC ARAH LIVH LSRC LSRD MGLC RBSC XYLH YJFF YPHD YTFT
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
94_R 189_E 1.44 0.80
90_R 190_D 0.76 0.17
54_D 196_L 0.74 0.17
99_E 182_R 0.70 0.14
92_F 189_E 0.61 0.09
49_G 192_K 0.61 0.09
95_M 182_R 0.56 0.07
150_R 197_L 0.56 0.07
106_F 183_A 0.56 0.07
150_R 193_M 0.55 0.06
95_M 189_E 0.52 0.05
75_A 200_N 0.51 0.05
99_E 185_R 0.50 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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