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OPENSEQ.org

CYSQ - TRML
UniProt: P22255 - P0AGJ7
Length: 403
Sequences: 377
Seq/Len: 0.98
I_Prob: 0.00

CYSQ - 3'(2'),5'-bisphosphate nucleotidase CysQ
Paralog alert: 0.66 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: CYSQ SUHB
TRML - tRNA (cytidine(34)-2'-O)-methyltransferase
Paralog alert: 0.90 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: RLMB TRML
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_L 18_I 1.18 0.00
113_G 64_R 1.13 0.00
121_N 103_T 1.11 0.00
187_V 133_L 1.07 0.00
57_P 131_M 1.07 0.00
58_D 109_S 1.05 0.00
92_I 124_M 1.03 0.00
19_V 141_V 1.01 0.00
144_V 75_L 0.99 0.00
91_F 147_Q 0.98 0.00
206_T 8_E 0.97 0.00
223_W 27_F 0.97 0.00
222_D 110_I 0.96 0.00
170_L 60_H 0.96 0.00
219_H 76_F 0.96 0.00
208_A 48_G 0.96 0.00
121_N 12_P 0.95 0.00
38_T 60_H 0.94 0.00
92_I 140_V 0.92 0.00
174_Q 49_L 0.91 0.00
115_V 56_A 0.91 0.00
115_V 50_D 0.90 0.00
124_Y 106_L 0.90 0.00
104_L 24_N 0.89 0.00
185_C 40_D 0.89 0.00
89_K 139_V 0.89 0.00
25_P 12_P 0.88 0.00
172_E 7_Y 0.88 0.00
203_I 41_D 0.87 0.00
113_G 65_A 0.87 0.00
226_K 79_T 0.86 0.00
54_T 97_L 0.86 0.00
49_M 128_S 0.86 0.00
14_D 111_L 0.85 0.00
98_F 79_T 0.85 0.00
109_K 75_L 0.85 0.00
20_Y 78_L 0.84 0.00
160_D 117_E 0.84 0.00
190_G 29_L 0.84 0.00
222_D 63_Y 0.84 0.00
218_A 18_I 0.83 0.00
198_F 30_H 0.81 0.00
98_F 118_Q 0.81 0.00
6_C 103_T 0.81 0.00
123_M 103_T 0.81 0.00
107_H 68_E 0.80 0.00
80_W 25_T 0.80 0.00
98_F 78_L 0.80 0.00
16_I 136_A 0.80 0.00
178_I 97_L 0.80 0.00
214_A 49_L 0.80 0.00
36_P 97_L 0.80 0.00
109_K 98_M 0.80 0.00
152_V 140_V 0.79 0.00
209_G 95_D 0.79 0.00
104_L 17_N 0.79 0.00
6_C 64_R 0.78 0.00
112_L 55_T 0.78 0.00
220_V 24_N 0.78 0.00
128_E 134_S 0.78 0.00
123_M 47_A 0.78 0.00
28_V 64_R 0.77 0.00
110_P 97_L 0.77 0.00
170_L 139_V 0.77 0.00
194_L 112_D 0.77 0.00
50_D 64_R 0.77 0.00
123_M 17_N 0.77 0.00
56_T 11_I 0.77 0.00
91_F 46_R 0.77 0.00
173_H 49_L 0.77 0.00
81_L 54_F 0.76 0.00
47_V 64_R 0.76 0.00
148_R 120_I 0.76 0.00
183_K 133_L 0.76 0.00
92_I 15_T 0.76 0.00
94_R 86_H 0.76 0.00
109_K 78_L 0.76 0.00
54_T 4_I 0.75 0.00
181_S 142_Y 0.75 0.00
221_H 2_L 0.75 0.00
91_F 87_S 0.74 0.00
196_P 103_T 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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