May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
MURE - RSMH
UniProt: P22188 - P60390
Length: 808
Sequences: 1264
Seq/Len: 1.60
I_Prob: 0.07
MURE - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
Paralog alert: 0.63 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: MPL MURC MURD MURE MURF 		RSMH - Ribosomal RNA small subunit methyltransferase H
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
339_V 289_P 1.40 0.07
409_A 300_A 0.88 0.01
336_L 32_F 0.84 0.01
102_Y 98_I 0.83 0.01
162_A 82_L 0.82 0.01
164_D 289_P 0.81 0.01
219_E 11_L 0.81 0.01
239_I 147_D 0.79 0.01
380_L 150_W 0.78 0.01
384_F 180_T 0.77 0.01
124_T 5_Y 0.76 0.01
430_A 50_R 0.75 0.01
126_L 75_I 0.72 0.01
290_F 222_A 0.72 0.01
308_N 37_H 0.72 0.01
371_A 225_S 0.72 0.01
114_V 305_L 0.72 0.01
192_H 310_R 0.70 0.01
61_A 189_A 0.70 0.01
138_S 300_A 0.70 0.01
348_A 300_A 0.70 0.01
488_A 121_D 0.69 0.01
45_Q 248_I 0.69 0.01
34_A 171_R 0.69 0.01
304_M 118_F 0.69 0.01
227_L 148_I 0.68 0.01
208_S 64_A 0.68 0.01
479_L 54_I 0.68 0.01
39_V 121_D 0.67 0.01
420_E 240_S 0.66 0.01
488_A 300_A 0.66 0.01
298_E 291_E 0.65 0.01
188_G 71_R 0.65 0.01
423_A 139_W 0.65 0.01
64_I 287_L 0.65 0.01
40_A 42_L 0.64 0.01
397_L 214_S 0.64 0.01
63_I 94_K 0.64 0.01
8_D 8_T 0.64 0.01
156_E 192_P 0.64 0.01
234_C 151_V 0.63 0.01
208_S 266_L 0.63 0.01
309_V 158_E 0.63 0.01
386_C 53_A 0.63 0.01
22_L 17_N 0.63 0.01
481_Y 303_S 0.63 0.01
56_I 146_A 0.63 0.01
393_G 298_P 0.62 0.01
418_T 112_A 0.62 0.01
22_L 138_E 0.62 0.01
364_A 240_S 0.62 0.01
223_A 84_E 0.62 0.01
114_V 132_R 0.62 0.01
423_A 144_E 0.62 0.01
338_P 90_D 0.61 0.01
188_G 37_H 0.61 0.01
483_D 159_R 0.61 0.01
479_L 186_V 0.61 0.01
141_M 74_I 0.61 0.01
220_H 284_L 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.4947 seconds.