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OPENSEQ.org

HYAD - HYPC
UniProt: P19930 - P0AAM3
Length: 285
Sequences: 243
Seq/Len: 0.94
I_Prob: 0.00

HYAD - Hydrogenase 1 maturation protease
Paralog alert: 0.57 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: HYAD HYBD HYCI
HYPC - Hydrogenase isoenzymes formation protein HypC
Paralog alert: 0.49 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: HYBG HYPC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
94_S 29_D 1.39 0.00
84_I 52_V 1.27 0.00
102_E 19_V 1.24 0.00
36_P 61_E 1.23 0.00
84_I 5_V 1.19 0.00
138_A 5_V 1.17 0.00
97_Q 71_L 1.11 0.00
67_I 65_R 1.11 0.00
163_A 61_E 1.08 0.00
6_V 76_D 1.07 0.00
78_T 52_V 1.06 0.00
119_L 69_D 1.04 0.00
27_E 63_E 1.03 0.00
74_G 54_F 1.01 0.00
77_R 30_L 1.00 0.00
66_A 7_G 0.99 0.00
64_L 76_D 0.97 0.00
55_V 7_G 0.96 0.00
39_V 73_N 0.93 0.00
82_E 76_D 0.93 0.00
106_L 47_W 0.93 0.00
142_L 49_L 0.92 0.00
46_T 66_D 0.91 0.00
127_L 11_T 0.91 0.00
140_E 66_D 0.91 0.00
136_E 62_A 0.90 0.00
78_T 29_D 0.90 0.00
139_R 8_Q 0.89 0.00
83_R 62_A 0.88 0.00
162_P 58_V 0.88 0.00
145_A 66_D 0.88 0.00
57_S 62_A 0.88 0.00
48_G 60_N 0.87 0.00
146_E 30_L 0.87 0.00
8_V 17_A 0.87 0.00
142_L 5_V 0.87 0.00
63_I 18_K 0.86 0.00
162_P 30_L 0.86 0.00
134_L 4_G 0.85 0.00
105_A 17_A 0.85 0.00
27_E 29_D 0.85 0.00
120_V 37_D 0.85 0.00
145_A 67_T 0.85 0.00
99_S 72_Q 0.84 0.00
59_S 16_Q 0.84 0.00
37_E 50_V 0.82 0.00
128_D 17_A 0.82 0.00
24_R 7_G 0.82 0.00
149_A 50_V 0.81 0.00
19_E 28_V 0.81 0.00
62_L 76_D 0.81 0.00
6_V 61_E 0.81 0.00
52_L 5_V 0.80 0.00
136_E 25_Q 0.80 0.00
114_P 60_N 0.79 0.00
149_A 55_A 0.79 0.00
142_L 31_T 0.78 0.00
76_L 9_I 0.78 0.00
153_L 24_I 0.78 0.00
83_R 66_D 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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