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OPENSEQ.org

BETI - END8
UniProt: P17446 - P50465
Length: 458
Sequences: 311
Seq/Len: 0.70
I_Prob: 0.01

BETI - HTH-type transcriptional regulator BetI
Paralog alert: 0.77 [within 20: 0.23] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
END8 - Endonuclease 8
Paralog alert: 0.31 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: END8 FPG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_R 96_T 1.58 0.01
120_P 48_V 1.40 0.01
31_T 237_P 1.25 0.00
20_E 158_L 1.21 0.00
167_R 104_Y 1.12 0.00
12_R 236_E 1.05 0.00
93_G 259_P 1.03 0.00
86_Q 257_W 1.01 0.00
25_V 255_F 0.99 0.00
135_S 158_L 0.99 0.00
145_L 158_L 0.99 0.00
95_N 136_T 0.99 0.00
166_L 158_L 0.98 0.00
28_H 236_E 0.96 0.00
70_D 20_G 0.95 0.00
123_Y 79_D 0.94 0.00
37_R 211_A 0.93 0.00
172_G 48_V 0.92 0.00
131_R 181_L 0.92 0.00
96_F 16_A 0.92 0.00
36_A 160_D 0.91 0.00
68_L 23_L 0.90 0.00
137_L 230_V 0.90 0.00
36_A 216_V 0.89 0.00
105_A 122_F 0.88 0.00
123_Y 65_L 0.88 0.00
24_E 200_H 0.86 0.00
161_I 175_I 0.86 0.00
165_W 67_S 0.86 0.00
164_L 77_V 0.84 0.00
82_G 173_V 0.84 0.00
8_S 121_P 0.83 0.00
83_S 136_T 0.82 0.00
86_Q 81_G 0.82 0.00
17_A 245_I 0.81 0.00
97_D 64_T 0.81 0.00
59_A 117_L 0.81 0.00
86_Q 189_D 0.81 0.00
17_A 178_Q 0.81 0.00
12_R 131_L 0.81 0.00
123_Y 42_G 0.80 0.00
11_R 20_G 0.79 0.00
38_R 235_G 0.79 0.00
16_D 233_R 0.79 0.00
38_R 92_V 0.79 0.00
14_L 23_L 0.79 0.00
67_Q 257_W 0.78 0.00
48_H 167_L 0.78 0.00
157_L 159_L 0.78 0.00
147_R 233_R 0.77 0.00
25_V 47_H 0.77 0.00
91_I 126_V 0.77 0.00
72_V 23_L 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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