OPENSEQ.org
S07 - S15
UniProt: P17291 - Q5SJ76
Length: 245
Sequences: 1162
Seq/Len: 4.74
I_Prob: 0.09
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeGOContact Map
3v2c3v2cGO 3v2eGOContact Map
2uub2uubGOContact Map
2j002j00GO 2j02GOContact Map
3t1y3t1yGOContact Map
4juw4juwGOContact Map
2uua2uuaGOContact Map
4b3m4b3mGOContact Map
2uxc2uxcGOContact Map
4kix4kiyGO 4kj0GO 4kj2GO 4kj4GOContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
4_R 79_R 1.10 0.09
77_S 60_V 1.09 0.08
52_E 10_K 1.08 0.08
107_A 17_R 1.07 0.08
84_N 61_G 1.05 0.07
58_P 54_R 1.05 0.07
99_L 55_G 0.94 0.05
29_K 61_G 0.91 0.05
28_N 26_E 0.90 0.04
140_D 86_G 0.88 0.04
83_A 59_M 0.87 0.04
138_K 2_P 0.85 0.04
84_N 87_I 0.85 0.04
152_A 18_F 0.83 0.04
59_L 75_P 0.81 0.03
131_K 43_L 0.81 0.03
61_V 47_K 0.76 0.03
83_A 35_R 0.75 0.03
45_D 25_T 0.75 0.03
40_A 53_H 0.72 0.02
149_R 73_E 0.71 0.02
64_Q 13_Q 0.71 0.02
102_R 88_R 0.71 0.02
19_G 5_K 0.70 0.02
29_K 43_L 0.70 0.02
64_Q 15_F 0.69 0.02
4_R 75_P 0.69 0.02
131_K 5_K 0.69 0.02
16_L 6_E 0.69 0.02
115_R 16_A 0.68 0.02
7_A 18_F 0.68 0.02
135_V 75_P 0.68 0.02
102_R 55_G 0.67 0.02
28_N 70_L 0.66 0.02
19_G 83_E 0.66 0.02
139_E 38_R 0.66 0.02
60_K 48_K 0.65 0.02
97_Q 5_K 0.63 0.02
2_A 60_V 0.63 0.02
41_R 72_R 0.63 0.02
25_A 65_R 0.62 0.02
96_Q 58_M 0.62 0.02
26_F 60_V 0.62 0.02
76_R 6_E 0.62 0.02
138_K 89_G 0.61 0.01
27_I 13_Q 0.61 0.01
89_M 87_I 0.61 0.01
134_A 45_V 0.61 0.01
131_K 40_S 0.60 0.01
6_R 5_K 0.60 0.01
40_A 51_H 0.60 0.01
49_I 62_Q 0.60 0.01
110_Q 35_R 0.60 0.01
70_K 65_R 0.59 0.01
113_E 20_G 0.59 0.01
156_W 46_H 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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