OPENSEQ.org
S07 - S13
UniProt: P17291 - P80377
Length: 282
Sequences: 1267
Seq/Len: 4.54
I_Prob: 0.35
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeGMContact Map
3v2c3v2cGM 3v2eGMContact Map
2uub2uubGMContact Map
2j002j00GM 2j02GMContact Map
3t1y3t1yGMContact Map
4juw4juwGMContact Map
2uua2uuaGMContact Map
4b3m4b3mGMContact Map
2uxc2uxcGMContact Map
4kix4kiyGM 4kj0GM 4kj2GM 4kj4GMContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
131_K 84_I 1.25 0.35
31_M 88_R 1.00 0.18
76_R 18_A 0.96 0.16
32_R 18_A 0.89 0.12
69_V 104_R 0.87 0.11
100_A 12_N 0.87 0.11
152_A 34_L 0.86 0.11
115_R 51_A 0.82 0.09
100_A 25_I 0.82 0.09
115_R 44_R 0.81 0.09
58_P 98_V 0.81 0.09
22_L 114_R 0.81 0.09
92_S 5_A 0.80 0.09
23_V 11_R 0.79 0.08
8_E 18_A 0.79 0.08
7_A 38_G 0.79 0.08
149_R 49_T 0.78 0.08
119_R 85_G 0.77 0.07
126_D 69_E 0.77 0.07
156_W 7_V 0.77 0.07
73_M 118_A 0.76 0.07
40_A 113_P 0.76 0.07
115_R 56_L 0.76 0.07
8_E 115_K 0.76 0.07
107_A 11_R 0.75 0.07
73_M 83_D 0.74 0.07
24_T 115_K 0.73 0.06
138_K 54_V 0.72 0.06
6_R 46_K 0.71 0.06
142_E 78_I 0.71 0.06
93_P 38_G 0.71 0.06
57_E 12_N 0.69 0.05
91_V 114_R 0.69 0.05
18_Y 12_N 0.69 0.05
94_R 114_R 0.69 0.05
56_Q 23_Y 0.69 0.05
83_A 50_E 0.69 0.05
131_K 37_T 0.68 0.05
24_T 120_K 0.67 0.05
100_A 30_A 0.67 0.05
53_K 82_M 0.67 0.05
61_V 29_R 0.67 0.05
2_A 113_P 0.66 0.05
61_V 11_R 0.66 0.05
30_I 83_D 0.66 0.04
134_A 82_M 0.66 0.04
53_K 102_R 0.65 0.04
114_R 27_K 0.65 0.04
63_K 11_R 0.65 0.04
60_K 116_T 0.65 0.04
131_K 11_R 0.65 0.04
11_Q 118_A 0.65 0.04
86_Q 67_E 0.64 0.04
125_M 12_N 0.64 0.04
113_E 113_P 0.63 0.04
17_V 82_M 0.63 0.04
51_Q 66_L 0.63 0.04
6_R 12_N 0.63 0.04
108_A 67_E 0.63 0.04
100_A 39_I 0.63 0.04
118_V 16_D 0.62 0.04
14_P 30_A 0.62 0.04
69_V 111_K 0.62 0.04
56_Q 53_V 0.62 0.04
84_N 39_I 0.62 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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