OPENSEQ.org
S07 - S09
UniProt: P17291 - P80374
Length: 284
Sequences: 1350
Seq/Len: 4.79
I_Prob: 0.63
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeGIContact Map
3v2c3v2cGI 3v2eGIContact Map
2uub2uubGIContact Map
2j002j00GI 2j02GIContact Map
3t1y3t1yGIContact Map
4juw4juwGIContact Map
2uua2uuaGIContact Map
4b3m4b3mGIContact Map
2uxc2uxcGIContact Map
4kix4kiyGI 4kj0GI 4kj2GI 4kj4GIContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_Q 48_E 1.36 0.63
53_K 90_P 1.07 0.36
64_Q 57_G 0.93 0.23
125_M 27_T 0.93 0.23
63_K 117_H 0.90 0.21
154_Y 114_Y 0.90 0.20
40_A 39_G 0.88 0.19
138_K 62_Y 0.86 0.18
52_E 27_T 0.86 0.18
17_V 40_L 0.85 0.17
21_V 88_Y 0.84 0.17
99_L 85_L 0.83 0.16
131_K 5_Y 0.82 0.16
70_K 54_D 0.81 0.15
101_L 70_K 0.81 0.15
143_R 95_K 0.81 0.15
20_D 34_N 0.80 0.14
20_D 32_D 0.79 0.14
135_V 61_A 0.77 0.13
16_L 28_V 0.76 0.12
23_V 78_K 0.76 0.12
79_R 104_R 0.76 0.12
119_R 79_L 0.75 0.12
52_E 32_D 0.75 0.12
38_L 121_R 0.74 0.11
58_P 12_E 0.74 0.11
143_R 43_A 0.74 0.11
101_L 122_A 0.74 0.11
40_A 75_D 0.74 0.11
115_R 32_D 0.74 0.11
59_L 32_D 0.72 0.10
85_Y 104_R 0.71 0.10
42_I 85_L 0.71 0.10
147_A 100_G 0.71 0.10
113_E 82_A 0.70 0.09
81_G 126_S 0.70 0.09
129_E 109_V 0.70 0.09
86_Q 104_R 0.70 0.09
125_M 94_A 0.69 0.09
78_R 104_R 0.68 0.08
30_I 23_N 0.67 0.08
70_K 42_R 0.67 0.08
67_E 66_R 0.67 0.08
52_E 35_E 0.66 0.08
143_R 20_R 0.66 0.08
131_K 18_F 0.66 0.07
92_S 59_F 0.65 0.07
72_R 101_F 0.65 0.07
149_R 82_A 0.65 0.07
9_V 35_E 0.65 0.07
4_R 38_Q 0.65 0.07
69_V 12_E 0.64 0.07
18_Y 114_Y 0.64 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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