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OPENSEQ.org

ICLR - YJAB
UniProt: P16528 - P09163
Length: 421
Sequences: 350
Seq/Len: 0.90
I_Prob: 0.00

ICLR - Acetate operon repressor
Paralog alert: 0.70 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ALLR ICLR KDGR MHPR RHMR YAGI YIAJ YJHI
YJAB - Uncharacterized N-acetyltransferase YjaB
Paralog alert: 0.86 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_S 88_G 1.13 0.00
225_A 84_G 0.94 0.00
49_L 53_W 0.86 0.00
29_R 60_D 0.84 0.00
114_E 85_C 0.83 0.00
166_L 84_G 0.82 0.00
45_A 91_L 0.81 0.00
223_L 88_G 0.81 0.00
162_G 78_I 0.80 0.00
246_R 122_F 0.79 0.00
150_I 62_P 0.79 0.00
117_G 111_E 0.78 0.00
58_S 83_R 0.78 0.00
203_Q 92_V 0.78 0.00
187_T 92_V 0.75 0.00
201_L 123_K 0.74 0.00
79_L 19_I 0.74 0.00
189_A 64_G 0.73 0.00
133_I 75_A 0.72 0.00
135_I 18_A 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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