May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GLGX - RMLA2
UniProt: P15067 - P61887
Length: 950
Sequences: 581
Seq/Len: 0.65
I_Prob: 0.00

GLGX - Glycogen debranching enzyme
Paralog alert: 0.81 [within 20: 0.35] - ratio of genomes with paralogs
Cluster includes: AMY2 GLGX MALZ SUCP TREC
RMLA2 - Glucose-1-phosphate thymidylyltransferase 2
Paralog alert: 0.91 [within 20: 0.31] - ratio of genomes with paralogs
Cluster includes: GALF GALU RMLA1 RMLA2
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
403_F 132_V 1.23 0.00
519_G 97_L 1.06 0.00
308_L 37_P 0.96 0.00
630_I 127_T 0.95 0.00
176_Y 195_L 0.95 0.00
14_A 104_L 0.95 0.00
265_N 136_Q 0.94 0.00
129_C 132_V 0.94 0.00
244_F 132_V 0.91 0.00
651_G 98_N 0.90 0.00
21_V 21_V 0.90 0.00
655_F 100_E 0.88 0.00
366_V 90_F 0.88 0.00
314_V 233_A 0.86 0.00
583_Y 177_D 0.85 0.00
400_A 5_I 0.85 0.00
604_S 100_E 0.84 0.00
462_G 90_F 0.83 0.00
439_V 135_Y 0.83 0.00
610_A 135_Y 0.82 0.00
14_A 135_Y 0.81 0.00
366_V 42_M 0.81 0.00
97_A 48_E 0.80 0.00
103_E 136_Q 0.80 0.00
352_P 154_A 0.79 0.00
192_G 168_W 0.79 0.00
559_K 232_E 0.79 0.00
133_V 154_A 0.79 0.00
49_L 154_A 0.78 0.00
256_I 126_R 0.78 0.00
630_I 189_P 0.78 0.00
16_Y 45_G 0.78 0.00
539_D 200_I 0.77 0.00
438_L 188_K 0.77 0.00
53_S 5_I 0.77 0.00
178_A 110_I 0.77 0.00
602_L 207_A 0.77 0.00
323_Y 206_E 0.76 0.00
290_I 115_G 0.76 0.00
611_I 210_L 0.75 0.00
435_A 127_T 0.75 0.00
288_Y 214_L 0.75 0.00
40_A 154_A 0.75 0.00
12_L 155_I 0.75 0.00
196_L 79_E 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.5665 seconds.