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OPENSEQ.org

MURD - MURG
UniProt: P14900 - P17443
Length: 793
Sequences: 1232
Seq/Len: 1.58
I_Prob: 0.00

MURD - UDP-N-acetylmuramoylalanine--D-glutamate ligase
Paralog alert: 0.97 [within 20: 0.37] - ratio of genomes with paralogs
Cluster includes: MPL MURC MURD MURE MURF
MURG - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
Paralog alert: 0.39 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: MURG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
69_I 135_K 0.97 0.00
215_D 49_L 0.92 0.00
360_L 251_Y 0.89 0.00
148_L 265_T 0.86 0.00
268_H 341_A 0.86 0.00
355_P 197_L 0.85 0.00
275_A 141_A 0.85 0.00
92_I 114_A 0.85 0.00
276_A 346_A 0.83 0.00
92_I 324_E 0.83 0.00
286_P 351_R 0.83 0.00
125_E 274_L 0.83 0.00
186_D 147_A 0.82 0.00
40_T 60_I 0.82 0.00
183_D 19_V 0.81 0.00
300_L 287_Q 0.80 0.00
270_Y 286_R 0.80 0.00
280_A 187_V 0.80 0.00
24_F 107_S 0.79 0.00
73_P 218_S 0.79 0.00
154_L 318_L 0.79 0.00
51_V 192_Q 0.79 0.00
121_T 295_L 0.79 0.00
353_F 266_V 0.79 0.00
153_E 243_F 0.79 0.00
63_L 351_R 0.78 0.00
332_N 24_A 0.78 0.00
176_T 164_T 0.77 0.00
131_G 31_A 0.77 0.00
306_V 261_S 0.77 0.00
191_G 269_I 0.77 0.00
296_T 185_V 0.77 0.00
262_M 226_V 0.76 0.00
396_R 168_A 0.76 0.00
294_L 301_A 0.76 0.00
288_A 331_E 0.75 0.00
186_D 188_V 0.75 0.00
122_L 192_Q 0.75 0.00
394_A 52_K 0.75 0.00
124_G 342_T 0.75 0.00
130_A 188_V 0.74 0.00
251_V 298_A 0.74 0.00
394_A 343_E 0.74 0.00
306_V 19_V 0.74 0.00
264_L 128_G 0.73 0.00
396_R 324_E 0.73 0.00
84_A 276_A 0.73 0.00
63_L 139_K 0.73 0.00
75_I 100_L 0.73 0.00
228_C 98_V 0.73 0.00
305_E 345_V 0.73 0.00
102_E 295_L 0.73 0.00
416_S 8_L 0.73 0.00
216_A 139_K 0.72 0.00
176_T 319_A 0.72 0.00
286_P 75_A 0.72 0.00
197_A 185_V 0.72 0.00
216_A 155_A 0.71 0.00
288_A 327_L 0.71 0.00
260_K 277_L 0.71 0.00
270_Y 326_L 0.71 0.00
52_E 150_G 0.71 0.00
83_S 277_L 0.71 0.00
283_A 72_A 0.71 0.00
222_R 60_I 0.70 0.00
89_G 177_A 0.70 0.00
142_L 65_L 0.70 0.00
177_I 30_M 0.69 0.00
49_E 319_A 0.69 0.00
88_A 117_L 0.69 0.00
198_A 279_V 0.69 0.00
403_Q 322_S 0.69 0.00
390_T 158_V 0.69 0.00
235_M 119_I 0.69 0.00
82_L 336_A 0.69 0.00
348_G 12_A 0.69 0.00
136_V 44_R 0.69 0.00
309_E 347_N 0.68 0.00
392_E 343_E 0.68 0.00
403_Q 93_A 0.68 0.00
110_I 7_R 0.68 0.00
394_A 129_I 0.68 0.00
176_T 95_K 0.68 0.00
185_M 194_A 0.68 0.00
378_A 86_Q 0.68 0.00
330_A 199_Q 0.67 0.00
51_V 318_L 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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