May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

BIOC - BIOD1
UniProt: P12999 - P13000
Length: 476
Sequences: 399
Seq/Len: 0.84
I_Prob: 0.00

BIOC - Malonyl-CoA O-methyltransferase BioC
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP
BIOD1 - ATP-dependent dethiobiotin synthetase BioD 1
Paralog alert: 0.29 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: BIOD1 BIOD2
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
153_W 121_W 1.29 0.00
30_S 99_M 1.27 0.00
241_Y 143_I 1.25 0.00
95_E 123_T 1.23 0.00
219_T 61_R 1.23 0.00
149_L 10_T 1.18 0.00
107_A 207_L 1.18 0.00
225_R 114_L 1.16 0.00
85_A 7_V 1.15 0.00
245_L 7_V 1.14 0.00
53_P 123_T 1.13 0.00
6_K 153_I 1.09 0.00
38_L 75_Y 1.09 0.00
95_E 40_V 1.07 0.00
81_R 66_Q 1.04 0.00
69_A 153_I 1.04 0.00
51_C 204_I 1.04 0.00
66_Q 174_V 1.04 0.00
145_S 138_E 1.03 0.00
183_H 143_I 1.02 0.00
240_T 106_L 1.00 0.00
235_G 223_A 1.00 0.00
188_T 174_V 1.00 0.00
149_L 202_G 0.99 0.00
94_I 86_I 0.99 0.00
68_T 157_M 0.99 0.00
130_V 86_I 0.99 0.00
237_Y 159_T 0.99 0.00
28_R 140_L 0.99 0.00
73_S 171_A 0.98 0.00
86_A 153_I 0.98 0.00
187_I 7_V 0.98 0.00
233_Q 222_L 0.97 0.00
1_M 211_P 0.96 0.00
153_W 69_Y 0.95 0.00
206_A 39_P 0.94 0.00
194_A 181_P 0.94 0.00
146_L 200_L 0.94 0.00
15_R 91_G 0.94 0.00
72_L 118_A 0.94 0.00
197_A 144_L 0.94 0.00
223_L 94_I 0.93 0.00
163_N 121_W 0.93 0.00
48_D 173_W 0.93 0.00
46_V 159_T 0.93 0.00
102_A 95_E 0.93 0.00
250_R 168_L 0.93 0.00
139_T 25_Q 0.92 0.00
99_L 67_L 0.92 0.00
48_D 73_N 0.92 0.00
26_L 207_L 0.92 0.00
150_H 220_I 0.92 0.00
145_S 37_Y 0.91 0.00
240_T 92_R 0.91 0.00
48_D 41_A 0.91 0.00
231_P 82_S 0.91 0.00
196_S 137_Q 0.91 0.00
111_L 118_A 0.91 0.00
153_W 52_R 0.91 0.00
10_A 69_Y 0.91 0.00
196_S 195_M 0.91 0.00
207_T 81_T 0.90 0.00
145_S 134_W 0.90 0.00
197_A 163_I 0.90 0.00
100_A 91_G 0.90 0.00
197_A 170_L 0.90 0.00
206_A 172_G 0.90 0.00
217_I 110_A 0.90 0.00
7_Q 157_M 0.88 0.00
147_P 7_V 0.88 0.00
29_Q 40_V 0.88 0.00
219_T 80_P 0.88 0.00
125_E 173_W 0.88 0.00
243_L 134_W 0.88 0.00
231_P 138_E 0.88 0.00
76_M 6_F 0.87 0.00
108_W 27_A 0.87 0.00
246_G 94_I 0.87 0.00
2_A 211_P 0.87 0.00
215_P 221_N 0.87 0.00
233_Q 213_N 0.86 0.00
189_L 153_I 0.86 0.00
116_C 6_F 0.86 0.00
59_H 88_A 0.86 0.00
212_G 219_Y 0.86 0.00
57_S 82_S 0.86 0.00
89_Y 35_A 0.86 0.00
108_W 121_W 0.86 0.00
107_A 214_A 0.86 0.00
60_W 123_T 0.86 0.00
59_H 7_V 0.86 0.00
225_R 141_P 0.85 0.00
226_L 14_V 0.85 0.00
153_W 56_A 0.85 0.00
239_L 154_N 0.84 0.00
96_S 139_Q 0.84 0.00
190_W 75_Y 0.84 0.00
223_L 153_I 0.84 0.00
59_H 206_W 0.84 0.00
79_Q 143_I 0.84 0.00
122_A 103_L 0.83 0.00
10_A 121_W 0.83 0.00
187_I 127_D 0.83 0.00
95_E 31_G 0.83 0.00
81_R 153_I 0.83 0.00
165_F 140_L 0.82 0.00
164_R 195_M 0.82 0.00
148_E 114_L 0.82 0.00
119_L 14_V 0.82 0.00
65_A 7_V 0.82 0.00
94_I 123_T 0.82 0.00
119_L 82_S 0.81 0.00
138_F 18_V 0.81 0.00
88_H 48_P 0.81 0.00
89_Y 82_S 0.81 0.00
75_P 220_I 0.81 0.00
30_S 77_F 0.81 0.00
76_M 10_T 0.81 0.00
114_Q 117_G 0.80 0.00
145_S 103_L 0.80 0.00
11_A 174_V 0.80 0.00
55_W 165_H 0.80 0.00
125_E 147_G 0.80 0.00
142_V 203_E 0.80 0.00
104_F 127_D 0.80 0.00
239_L 4_R 0.80 0.00
201_L 99_M 0.79 0.00
194_A 188_Y 0.79 0.00
91_A 170_L 0.79 0.00
141_L 27_A 0.79 0.00
51_C 60_Q 0.79 0.00
99_L 91_G 0.79 0.00
202_K 6_F 0.79 0.00
94_I 13_E 0.79 0.00
99_L 153_I 0.79 0.00
88_H 40_V 0.79 0.00
250_R 143_I 0.79 0.00
141_L 191_T 0.78 0.00
237_Y 87_S 0.78 0.00
29_Q 45_E 0.78 0.00
238_P 122_F 0.78 0.00
130_V 11_D 0.78 0.00
76_M 39_P 0.78 0.00
22_Q 33_R 0.77 0.00
163_N 152_C 0.77 0.00
81_R 193_T 0.77 0.00
5_N 136_T 0.77 0.00
204_I 153_I 0.77 0.00
189_L 206_W 0.77 0.00
61_R 90_E 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.4841 seconds.