May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

BIOA - MODA
UniProt: P12995 - P37329
Length: 686
Sequences: 819
Seq/Len: 1.26
I_Prob: 0.00

BIOA - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Paralog alert: 0.89 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ARGD ASTC BIOA GABT GSA PAT PUUE
MODA - Molybdate-binding periplasmic protein
Paralog alert: 0.78 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: CYSP MALE MODA POTD POTF SUBI THIB UGPB YCJN YDCS YNJB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
106_V 78_L 1.03 0.00
243_I 250_K 0.89 0.00
191_M 29_I 0.86 0.00
406_L 194_Y 0.84 0.00
242_L 232_T 0.80 0.00
59_Y 210_F 0.77 0.00
412_R 56_V 0.77 0.00
229_K 31_V 0.74 0.00
237_R 168_P 0.74 0.00
284_S 184_E 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.3609 seconds.