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OPENSEQ.org

ARGO - YGFI
UniProt: P11667 - P52044
Length: 509
Sequences: 442
Seq/Len: 0.92
I_Prob: 0.00

ARGO - Arginine exporter protein ArgO
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ARGO
YGFI - Uncharacterized HTH-type transcriptional regulator YgfI
Paralog alert: 0.87 [within 20: 0.49] - ratio of genomes with paralogs
Cluster includes: AAER ABGR ALLS CBL CYNR CYSB DMLR DSDC GCVA HCAR HDFR ICIA ILVY LEUO LRHA LYSR METR NAC NHAR OXYR PERR TDCA TTDR XAPR YAFC YAHB YBDO YBEF YBHD YCAN YCJZ YDCI YDHB YEEY YEIE YFER YFIE YGFI YHAJ YHJC YIAU YIDZ YJIE YNEJ YNFL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_G 228_F 1.09 0.00
135_S 228_F 1.07 0.00
17_L 244_I 1.04 0.00
55_I 98_G 1.03 0.00
11_L 150_H 1.02 0.00
58_G 174_L 1.00 0.00
84_G 25_A 0.98 0.00
173_R 51_F 0.95 0.00
9_L 14_L 0.94 0.00
9_L 176_S 0.94 0.00
10_A 179_Y 0.93 0.00
196_L 41_A 0.91 0.00
118_V 235_V 0.90 0.00
17_L 22_A 0.89 0.00
153_I 176_S 0.89 0.00
188_G 108_F 0.89 0.00
145_K 282_T 0.88 0.00
119_T 145_I 0.88 0.00
90_T 240_F 0.87 0.00
185_L 91_R 0.87 0.00
53_A 80_A 0.86 0.00
88_F 97_I 0.85 0.00
84_G 242_T 0.85 0.00
75_G 243_V 0.85 0.00
179_A 188_L 0.84 0.00
72_V 70_K 0.83 0.00
74_W 97_I 0.83 0.00
188_G 172_G 0.83 0.00
84_G 7_K 0.82 0.00
135_S 60_L 0.81 0.00
113_A 62_K 0.81 0.00
109_W 150_H 0.81 0.00
164_A 71_L 0.81 0.00
45_I 39_I 0.80 0.00
114_T 97_I 0.80 0.00
190_V 114_L 0.80 0.00
33_R 83_N 0.80 0.00
131_V 79_S 0.80 0.00
196_L 251_L 0.79 0.00
48_L 258_K 0.79 0.00
84_G 212_M 0.78 0.00
195_A 227_S 0.78 0.00
167_A 10_R 0.78 0.00
176_T 27_K 0.77 0.00
48_L 125_P 0.77 0.00
137_G 279_H 0.77 0.00
93_S 95_I 0.76 0.00
6_F 95_I 0.76 0.00
119_T 32_A 0.76 0.00
99_A 210_A 0.76 0.00
32_R 29_H 0.76 0.00
187_V 261_D 0.76 0.00
32_R 179_Y 0.76 0.00
79_F 144_F 0.76 0.00
119_T 148_P 0.75 0.00
42_L 233_S 0.75 0.00
39_I 194_L 0.75 0.00
133_L 114_L 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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