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OPENSEQ.org

RNPH - SLMA
UniProt: P0CG19 - P0C093
Length: 426
Sequences: 294
Seq/Len: 0.70
I_Prob: 0.00

RNPH - Inactive ribonuclease PH
Paralog alert: 0.69 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: RNPH
SLMA - Nucleoid occlusion factor SlmA
Paralog alert: 0.84 [within 20: 0.25] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
160_A 12_R 1.22 0.00
155_M 59_F 0.98 0.00
56_Q 19_L 0.97 0.00
154_P 49_Y 0.97 0.00
224_E 147_E 0.97 0.00
69_S 131_R 0.97 0.00
200_V 92_V 0.92 0.00
60_T 62_L 0.87 0.00
204_A 104_G 0.86 0.00
156_K 127_Q 0.85 0.00
111_T 51_H 0.84 0.00
13_P 82_K 0.82 0.00
166_I 39_A 0.81 0.00
10_Q 155_E 0.79 0.00
184_E 181_R 0.79 0.00
101_A 154_D 0.78 0.00
56_Q 110_T 0.77 0.00
98_L 108_I 0.76 0.00
114_L 26_S 0.75 0.00
10_Q 153_T 0.75 0.00
64_G 31_R 0.75 0.00
102_V 42_G 0.75 0.00
3_P 119_D 0.75 0.00
143_K 42_G 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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