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OPENSEQ.org

SECG - TPIS
UniProt: P0AG99 - P0A858
Length: 365
Sequences: 291
Seq/Len: 0.82
I_Prob: 0.01

SECG - Protein-export membrane protein SecG
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECG
TPIS - Triosephosphate isomerase
Paralog alert: 0.08 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TPIS
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
41_T 42_P 1.56 0.01
50_N 78_T 1.42 0.01
40_A 42_P 1.31 0.01
65_I 85_D 1.23 0.01
32_A 183_A 1.23 0.01
20_I 47_I 1.17 0.01
64_F 6_V 1.14 0.01
45_S 42_P 1.12 0.00
26_K 227_I 1.12 0.00
64_F 218_A 1.07 0.00
60_A 186_V 1.05 0.00
51_F 150_V 1.05 0.00
32_A 227_I 1.05 0.00
19_L 218_A 1.04 0.00
43_F 77_E 1.02 0.00
36_A 65_N 1.02 0.00
17_V 114_A 1.02 0.00
57_A 218_A 1.02 0.00
48_S 230_A 1.00 0.00
48_S 218_A 0.98 0.00
42_L 125_L 0.97 0.00
19_L 110_A 0.96 0.00
54_R 218_A 0.96 0.00
44_G 77_E 0.95 0.00
17_V 47_I 0.95 0.00
25_G 150_V 0.94 0.00
67_S 125_L 0.94 0.00
20_I 224_Q 0.94 0.00
17_V 84_K 0.93 0.00
22_L 151_L 0.93 0.00
41_T 121_L 0.93 0.00
70_L 163_V 0.93 0.00
1_M 85_D 0.92 0.00
81_G 78_T 0.91 0.00
30_M 132_A 0.91 0.00
64_F 14_G 0.91 0.00
24_Q 14_G 0.91 0.00
5_L 163_V 0.90 0.00
32_A 226_D 0.90 0.00
38_A 179_T 0.90 0.00
60_A 139_T 0.90 0.00
64_F 248_A 0.89 0.00
43_F 74_F 0.89 0.00
15_G 164_I 0.88 0.00
41_T 183_A 0.88 0.00
16_L 4_P 0.88 0.00
14_I 206_I 0.87 0.00
1_M 83_L 0.86 0.00
73_I 225_P 0.86 0.00
12_V 1_M 0.85 0.00
48_S 248_A 0.85 0.00
28_A 123_P 0.85 0.00
45_S 65_N 0.85 0.00
54_R 215_A 0.85 0.00
14_I 93_I 0.85 0.00
36_A 86_I 0.84 0.00
44_G 178_A 0.84 0.00
46_S 25_N 0.83 0.00
36_A 12_L 0.82 0.00
48_S 39_A 0.82 0.00
71_G 26_L 0.82 0.00
40_A 102_H 0.82 0.00
66_I 85_D 0.82 0.00
41_T 19_V 0.81 0.00
53_T 169_V 0.81 0.00
16_L 7_M 0.81 0.00
14_I 5_L 0.81 0.00
5_L 133_E 0.81 0.00
57_A 147_I 0.80 0.00
71_G 79_S 0.80 0.00
8_V 105_S 0.80 0.00
55_M 223_A 0.80 0.00
29_D 6_V 0.80 0.00
60_A 176_K 0.80 0.00
30_M 69_N 0.80 0.00
43_F 228_D 0.80 0.00
59_L 207_I 0.80 0.00
46_S 176_K 0.80 0.00
8_V 207_I 0.79 0.00
29_D 195_A 0.79 0.00
87_L 40_I 0.79 0.00
48_S 46_Y 0.79 0.00
11_I 142_V 0.78 0.00
20_I 70_L 0.78 0.00
6_L 36_C 0.78 0.00
16_L 133_E 0.77 0.00
4_A 180_P 0.77 0.00
80_K 214_N 0.77 0.00
50_N 116_L 0.77 0.00
30_M 70_L 0.77 0.00
28_A 183_A 0.77 0.00
17_V 248_A 0.77 0.00
75_S 213_V 0.77 0.00
65_I 69_N 0.77 0.00
17_V 127_I 0.77 0.00
16_L 104_E 0.76 0.00
20_I 20_H 0.76 0.00
13_A 78_T 0.76 0.00
68_L 232_V 0.75 0.00
44_G 150_V 0.75 0.00
18_G 164_I 0.75 0.00
57_A 248_A 0.75 0.00
17_V 50_A 0.75 0.00
58_L 47_I 0.75 0.00
61_T 149_A 0.74 0.00
65_I 60_M 0.74 0.00
22_L 153_T 0.74 0.00
62_L 169_V 0.74 0.00
30_M 150_V 0.74 0.00
52_M 192_D 0.74 0.00
1_M 19_V 0.74 0.00
55_M 132_A 0.74 0.00
10_L 74_F 0.74 0.00
45_S 192_D 0.74 0.00
14_I 120_G 0.73 0.00
1_M 230_A 0.73 0.00
15_G 51_K 0.73 0.00
28_A 66_V 0.73 0.00
73_I 213_V 0.73 0.00
45_S 198_D 0.73 0.00
8_V 136_A 0.73 0.00
15_G 67_D 0.72 0.00
69_V 188_K 0.72 0.00
7_V 2_R 0.72 0.00
26_K 152_K 0.72 0.00
13_A 45_M 0.72 0.00
55_M 46_Y 0.72 0.00
59_L 219_A 0.71 0.00
15_G 244_V 0.71 0.00
7_V 185_A 0.71 0.00
43_F 150_V 0.71 0.00
41_T 230_A 0.71 0.00
10_L 127_I 0.71 0.00
52_M 188_K 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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