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OPENSEQ.org

RS17 - SECY
UniProt: P0AG63 - P0AGA2
Length: 527
Sequences: 1012
Seq/Len: 1.98
I_Prob: 0.11

RS17 - 30S ribosomal protein S17
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS17
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_V 50_A 1.34 0.11
69_K 22_R 1.26 0.09
35_G 347_K 1.18 0.07
81_K 16_L 1.12 0.06
81_K 91_I 1.06 0.05
54_G 110_E 1.04 0.05
34_Y 353_V 1.00 0.04
30_K 347_K 0.99 0.04
60_E 320_L 0.97 0.04
55_I 256_R 0.97 0.04
78_V 190_I 0.97 0.04
33_I 92_I 0.96 0.03
52_E 224_A 0.96 0.03
34_Y 76_S 0.96 0.03
40_R 161_V 0.96 0.03
26_E 292_S 0.96 0.03
69_K 378_A 0.94 0.03
55_I 129_I 0.93 0.03
39_K 22_R 0.92 0.03
78_V 224_A 0.91 0.03
74_T 247_N 0.91 0.03
22_V 251_R 0.91 0.03
45_H 192_F 0.90 0.03
43_K 167_G 0.90 0.03
72_S 431_S 0.88 0.03
53_C 425_M 0.88 0.03
78_V 106_K 0.88 0.03
83_V 373_L 0.88 0.03
22_V 295_G 0.88 0.03
69_K 170_F 0.87 0.03
39_K 64_F 0.87 0.03
8_L 194_G 0.87 0.03
44_L 222_L 0.87 0.03
22_V 384_I 0.87 0.02
20_S 365_Y 0.86 0.02
44_L 391_M 0.86 0.02
45_H 125_L 0.86 0.02
43_K 76_S 0.86 0.02
39_K 171_L 0.85 0.02
70_T 257_V 0.85 0.02
8_L 172_M 0.85 0.02
69_K 264_H 0.85 0.02
14_S 120_T 0.85 0.02
81_K 284_I 0.85 0.02
39_K 168_T 0.85 0.02
39_K 424_M 0.84 0.02
58_V 292_S 0.84 0.02
61_I 215_L 0.84 0.02
74_T 99_H 0.84 0.02
58_V 378_A 0.84 0.02
69_K 236_F 0.84 0.02
29_V 44_I 0.83 0.02
20_S 228_F 0.83 0.02
52_E 237_V 0.83 0.02
21_I 253_Q 0.83 0.02
45_H 418_A 0.83 0.02
59_V 8_D 0.82 0.02
70_T 65_N 0.81 0.02
7_T 425_M 0.81 0.02
60_E 244_I 0.81 0.02
38_I 38_F 0.81 0.02
53_C 439_K 0.80 0.02
34_Y 10_Q 0.80 0.02
22_V 409_V 0.80 0.02
33_I 44_I 0.79 0.02
20_S 432_A 0.79 0.02
39_K 27_I 0.79 0.02
32_P 358_P 0.79 0.02
21_I 149_V 0.79 0.02
55_I 158_F 0.79 0.02
50_N 51_K 0.79 0.02
37_F 163_S 0.79 0.02
61_I 191_I 0.78 0.02
37_F 373_L 0.78 0.02
63_E 26_V 0.78 0.02
38_I 202_A 0.77 0.02
75_L 397_V 0.77 0.02
56_G 268_K 0.77 0.02
35_G 294_F 0.77 0.02
60_E 61_I 0.76 0.02
42_T 135_I 0.76 0.02
25_I 46_A 0.75 0.02
67_L 140_P 0.75 0.01
30_K 234_V 0.75 0.01
7_T 132_S 0.74 0.01
77_R 390_F 0.74 0.01
79_V 316_L 0.74 0.01
33_I 141_N 0.74 0.01
50_N 221_L 0.74 0.01
78_V 65_N 0.74 0.01
76_V 438_L 0.74 0.01
35_G 346_L 0.74 0.01
58_V 77_I 0.74 0.01
40_R 59_T 0.73 0.01
29_V 61_I 0.73 0.01
20_S 160_A 0.73 0.01
70_T 63_M 0.73 0.01
32_P 119_Y 0.73 0.01
33_I 79_A 0.73 0.01
38_I 243_R 0.73 0.01
56_G 276_P 0.73 0.01
60_E 405_S 0.73 0.01
69_K 154_F 0.73 0.01
54_G 21_R 0.73 0.01
23_V 221_L 0.73 0.01
60_E 425_M 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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