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OPENSEQ.org

YEHT - YEHX
UniProt: P0AFT5 - P33360
Length: 547
Sequences: 427
Seq/Len: 0.90
I_Prob: 0.00

YEHT - Transcriptional regulatory protein YehT
Paralog alert: 0.61 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: YEHT YPDB
YEHX - Putative osmoprotectant uptake system ATP-binding protein YehX
Paralog alert: 0.94 [within 20: 0.63] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
80_L 119_A 0.95 0.00
137_I 54_D 0.85 0.00
20_F 123_L 0.85 0.00
225_V 55_S 0.81 0.00
233_L 11_F 0.79 0.00
148_L 124_E 0.78 0.00
148_L 123_L 0.76 0.00
78_V 104_K 0.72 0.00
85_E 20_L 0.72 0.00
148_L 113_R 0.71 0.00
61_S 66_R 0.71 0.00
155_F 4_F 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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