May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

NUOE - NUOJ
UniProt: P0AFD1 - P0AFE0
Length: 350
Sequences: 586
Seq/Len: 1.79
I_Prob: 0.00

NUOE - NADH-quinone oxidoreductase subunit E
Paralog alert: 0.19 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUOE
NUOJ - NADH-quinone oxidoreductase subunit J
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NUOJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
71_G 45_S 1.14 0.00
114_N 151_G 1.14 0.00
161_L 37_L 1.11 0.00
72_V 58_V 1.10 0.00
73_A 73_M 1.02 0.00
49_W 33_I 1.02 0.00
143_M 118_G 1.00 0.00
126_F 46_L 1.00 0.00
49_W 47_G 1.00 0.00
111_K 114_V 0.99 0.00
52_D 44_F 0.99 0.00
78_Q 141_V 0.98 0.00
84_V 159_G 0.98 0.00
156_E 10_L 0.97 0.00
82_Q 28_A 0.96 0.00
71_G 36_L 0.96 0.00
49_W 27_H 0.96 0.00
122_F 113_G 0.95 0.00
71_G 75_N 0.94 0.00
110_E 95_G 0.94 0.00
65_P 83_Q 0.94 0.00
87_H 4_A 0.94 0.00
109_L 101_A 0.94 0.00
116_K 118_G 0.94 0.00
84_V 88_L 0.93 0.00
89_I 103_M 0.92 0.00
117_P 106_V 0.92 0.00
78_Q 32_L 0.92 0.00
61_V 56_I 0.92 0.00
74_T 158_V 0.91 0.00
63_G 28_A 0.91 0.00
33_R 57_I 0.91 0.00
109_L 8_C 0.90 0.00
50_V 12_A 0.90 0.00
54_A 43_F 0.89 0.00
121_T 88_L 0.89 0.00
156_E 129_V 0.89 0.00
54_A 142_E 0.88 0.00
124_G 129_V 0.88 0.00
138_D 37_L 0.88 0.00
130_P 49_Y 0.88 0.00
163_E 7_I 0.87 0.00
120_T 21_T 0.87 0.00
88_V 19_V 0.86 0.00
132_C 51_A 0.86 0.00
94_S 157_H 0.86 0.00
36_S 124_I 0.85 0.00
162_L 56_I 0.85 0.00
117_P 95_G 0.85 0.00
131_T 134_F 0.84 0.00
107_A 46_L 0.84 0.00
88_V 29_L 0.84 0.00
115_I 140_A 0.84 0.00
140_G 100_S 0.84 0.00
122_F 105_V 0.84 0.00
86_R 25_P 0.83 0.00
72_V 19_V 0.83 0.00
163_E 13_I 0.83 0.00
79_I 121_G 0.83 0.00
153_L 133_L 0.83 0.00
71_G 68_V 0.82 0.00
16_A 143_L 0.82 0.00
104_G 143_L 0.81 0.00
149_T 140_A 0.81 0.00
26_M 97_A 0.81 0.00
151_A 40_S 0.81 0.00
114_N 158_V 0.80 0.00
138_D 8_C 0.80 0.00
94_S 57_I 0.80 0.00
66_A 92_V 0.80 0.00
155_P 110_A 0.80 0.00
107_A 122_T 0.80 0.00
107_A 143_L 0.79 0.00
162_L 29_L 0.79 0.00
28_H 34_I 0.79 0.00
43_V 148_L 0.78 0.00
99_I 36_L 0.78 0.00
69_V 51_A 0.78 0.00
80_F 167_V 0.78 0.00
124_G 67_F 0.78 0.00
55_I 17_L 0.78 0.00
37_I 82_E 0.78 0.00
89_I 107_I 0.78 0.00
161_L 51_A 0.77 0.00
43_V 27_H 0.77 0.00
24_H 13_I 0.77 0.00
155_P 104_L 0.77 0.00
66_A 9_G 0.77 0.00
109_L 67_F 0.76 0.00
161_L 109_Y 0.76 0.00
107_A 7_I 0.76 0.00
96_V 36_L 0.76 0.00
39_A 145_S 0.76 0.00
128_L 142_E 0.76 0.00
74_T 137_Y 0.76 0.00
26_M 28_A 0.76 0.00
162_L 74_L 0.76 0.00
78_Q 98_I 0.76 0.00
82_Q 3_F 0.75 0.00
153_L 36_L 0.75 0.00
16_A 41_G 0.75 0.00
126_F 25_P 0.75 0.00
119_Q 13_I 0.75 0.00
164_R 146_M 0.75 0.00
61_V 43_F 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2307 seconds.