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OPENSEQ.org

NUOE - NUOH
UniProt: P0AFD1 - P0AFD4
Length: 491
Sequences: 506
Seq/Len: 1.07
I_Prob: 0.01

NUOE - NADH-quinone oxidoreductase subunit E
Paralog alert: 0.19 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUOE
NUOH - NADH-quinone oxidoreductase subunit H
Paralog alert: 0.24 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: HYCD HYFC NUOH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
64_I 83_F 1.38 0.01
152_H 41_G 1.22 0.00
91_Y 207_C 1.19 0.00
37_I 223_D 1.18 0.00
14_L 174_F 1.14 0.00
89_I 120_L 1.11 0.00
146_D 80_R 1.09 0.00
134_L 144_L 1.05 0.00
89_I 33_S 1.02 0.00
135_G 32_M 1.01 0.00
51_P 110_A 1.01 0.00
20_E 12_L 1.00 0.00
121_T 164_L 1.00 0.00
90_R 306_L 0.98 0.00
140_G 25_V 0.98 0.00
87_H 249_S 0.96 0.00
145_I 255_L 0.95 0.00
155_P 308_L 0.95 0.00
128_L 43_F 0.94 0.00
67_S 38_R 0.93 0.00
140_G 207_C 0.93 0.00
145_I 288_S 0.91 0.00
115_I 173_S 0.90 0.00
26_M 124_G 0.90 0.00
91_Y 94_L 0.90 0.00
39_A 231_G 0.89 0.00
100_N 115_G 0.89 0.00
107_A 89_I 0.89 0.00
84_V 83_F 0.89 0.00
50_V 226_H 0.88 0.00
129_L 240_G 0.88 0.00
109_L 240_G 0.88 0.00
81_R 42_L 0.88 0.00
163_E 243_I 0.87 0.00
143_M 89_I 0.87 0.00
109_L 110_A 0.87 0.00
74_T 253_V 0.87 0.00
160_E 304_I 0.87 0.00
31_D 55_G 0.87 0.00
61_V 13_L 0.87 0.00
94_S 231_G 0.87 0.00
105_I 251_L 0.86 0.00
148_D 306_L 0.86 0.00
43_V 174_F 0.86 0.00
72_V 126_A 0.85 0.00
64_I 159_F 0.85 0.00
103_Q 146_A 0.85 0.00
37_I 146_A 0.84 0.00
48_G 282_F 0.84 0.00
111_K 281_M 0.84 0.00
96_V 166_G 0.84 0.00
65_P 175_N 0.83 0.00
82_Q 178_D 0.83 0.00
22_I 131_L 0.83 0.00
93_D 312_N 0.83 0.00
79_I 16_L 0.83 0.00
163_E 101_V 0.83 0.00
16_A 250_A 0.83 0.00
35_A 298_M 0.82 0.00
152_H 255_L 0.82 0.00
38_E 280_M 0.81 0.00
100_N 251_L 0.81 0.00
101_G 69_F 0.81 0.00
96_V 188_N 0.81 0.00
43_V 101_V 0.81 0.00
43_V 158_V 0.81 0.00
56_H 230_S 0.81 0.00
60_D 197_I 0.81 0.00
55_I 202_A 0.80 0.00
87_H 203_G 0.80 0.00
73_A 150_S 0.80 0.00
105_I 196_F 0.80 0.00
115_I 36_E 0.80 0.00
90_R 297_V 0.79 0.00
52_D 147_M 0.79 0.00
49_W 158_V 0.79 0.00
162_L 197_I 0.79 0.00
158_I 190_I 0.79 0.00
74_T 265_L 0.79 0.00
113_L 279_M 0.78 0.00
132_C 206_V 0.78 0.00
64_I 153_T 0.78 0.00
55_I 84_T 0.78 0.00
63_G 80_R 0.78 0.00
153_L 120_L 0.78 0.00
124_G 180_V 0.77 0.00
127_T 33_S 0.77 0.00
60_D 85_L 0.77 0.00
42_I 132_F 0.77 0.00
16_A 173_S 0.76 0.00
77_S 123_A 0.76 0.00
154_T 80_R 0.76 0.00
116_K 15_I 0.76 0.00
144_M 297_V 0.76 0.00
136_N 236_L 0.76 0.00
122_F 136_S 0.76 0.00
131_T 221_L 0.76 0.00
122_F 110_A 0.75 0.00
36_S 247_T 0.75 0.00
74_T 310_L 0.75 0.00
27_H 54_W 0.75 0.00
104_G 38_R 0.75 0.00
68_D 231_G 0.75 0.00
78_Q 290_P 0.74 0.00
14_L 204_V 0.74 0.00
37_I 227_I 0.74 0.00
22_I 171_A 0.74 0.00
15_S 85_L 0.73 0.00
146_D 235_G 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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