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OPENSEQ.org

MURJ - RIMJ
UniProt: P0AF16 - P0A948
Length: 705
Sequences: 673
Seq/Len: 1.01
I_Prob: 0.00

MURJ - Probable peptidoglycan biosynthesis protein MurJ
Paralog alert: 0.92 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: DINF MDTK MURJ RFBX WZXC WZXE YEEO YGHQ
RIMJ - Ribosomal-protein-alanine acetyltransferase
Paralog alert: 0.83 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_V 137_H 1.08 0.00
343_T 111_I 0.94 0.00
399_L 151_R 0.92 0.00
271_L 45_W 0.88 0.00
50_L 111_I 0.83 0.00
400_A 157_A 0.81 0.00
301_D 94_F 0.80 0.00
112_V 168_K 0.79 0.00
178_A 36_A 0.79 0.00
90_L 40_H 0.78 0.00
69_A 107_L 0.78 0.00
169_I 28_A 0.78 0.00
335_S 159_L 0.77 0.00
274_F 74_S 0.77 0.00
350_T 38_N 0.75 0.00
363_G 162_E 0.75 0.00
332_L 13_L 0.75 0.00
400_A 147_P 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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