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OPENSEQ.org

FRE - RNFG
UniProt: P0AEN1 - P77285
Length: 439
Sequences: 283
Seq/Len: 0.69
I_Prob: 0.00

FRE - NAD(P)H-flavin reductase
Paralog alert: 0.73 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: FENR FRE
RNFG - Electron transport complex protein RnfG
Paralog alert: 0.35 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RNFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
191_G 145_F 1.53 0.00
109_I 62_S 1.31 0.00
150_C 150_I 1.28 0.00
130_P 109_G 1.22 0.00
150_C 110_A 1.21 0.00
212_D 24_A 1.16 0.00
226_F 150_I 1.16 0.00
104_R 85_D 1.14 0.00
68_S 89_A 1.10 0.00
198_I 16_A 1.09 0.00
36_Y 162_K 1.09 0.00
53_S 16_A 1.09 0.00
127_A 18_G 1.08 0.00
44_R 160_V 1.08 0.00
83_K 153_A 1.08 0.00
151_E 85_D 1.08 0.00
72_L 4_T 1.06 0.00
7_K 164_G 1.06 0.00
223_D 42_Q 1.05 0.00
155_L 173_A 1.05 0.00
89_V 13_A 1.04 0.00
93_H 116_V 1.03 0.00
128_R 23_T 1.02 0.00
155_L 70_E 1.02 0.00
7_K 35_A 1.02 0.00
14_I 121_V 1.01 0.00
189_D 79_Y 1.01 0.00
3_T 42_Q 1.00 0.00
14_I 183_A 0.99 0.00
30_S 12_L 0.99 0.00
100_D 33_T 0.99 0.00
83_K 75_E 0.99 0.00
72_L 89_A 0.99 0.00
160_P 10_I 0.98 0.00
79_D 178_R 0.98 0.00
78_M 12_L 0.97 0.00
5_S 29_M 0.97 0.00
22_R 12_L 0.97 0.00
216_S 12_L 0.96 0.00
78_M 37_Q 0.96 0.00
68_S 104_I 0.96 0.00
130_P 52_A 0.95 0.00
171_P 165_G 0.95 0.00
205_E 116_V 0.94 0.00
224_R 162_K 0.93 0.00
191_G 57_N 0.93 0.00
26_D 5_I 0.93 0.00
93_H 22_L 0.93 0.00
89_V 83_Q 0.93 0.00
160_P 90_A 0.92 0.00
103_E 132_D 0.92 0.00
143_E 149_K 0.92 0.00
166_P 24_A 0.92 0.00
14_I 12_L 0.92 0.00
42_D 37_Q 0.92 0.00
209_I 160_V 0.91 0.00
217_E 31_K 0.91 0.00
87_I 6_R 0.91 0.00
65_I 49_V 0.91 0.00
148_D 162_K 0.90 0.00
209_I 111_D 0.90 0.00
178_R 95_T 0.90 0.00
157_L 71_L 0.89 0.00
5_S 79_Y 0.89 0.00
135_T 165_G 0.87 0.00
44_R 174_T 0.87 0.00
53_S 145_F 0.87 0.00
209_I 169_Q 0.87 0.00
212_D 31_K 0.87 0.00
196_H 141_W 0.87 0.00
45_D 12_L 0.86 0.00
129_N 66_V 0.86 0.00
198_I 154_D 0.86 0.00
104_R 178_R 0.86 0.00
24_V 164_G 0.86 0.00
171_P 162_K 0.85 0.00
86_Q 158_W 0.85 0.00
72_L 164_G 0.85 0.00
102_E 139_S 0.85 0.00
28_A 116_V 0.85 0.00
60_F 104_I 0.85 0.00
103_E 64_Y 0.85 0.00
88_V 116_V 0.85 0.00
78_M 183_A 0.85 0.00
150_C 36_E 0.84 0.00
61_I 57_N 0.84 0.00
35_Q 45_L 0.84 0.00
77_V 117_L 0.84 0.00
131_N 132_D 0.84 0.00
97_W 45_L 0.83 0.00
100_D 169_Q 0.83 0.00
225_L 173_A 0.82 0.00
26_D 108_V 0.82 0.00
216_S 114_G 0.82 0.00
39_V 117_L 0.81 0.00
7_K 38_A 0.81 0.00
37_L 117_L 0.81 0.00
67_A 183_A 0.80 0.00
143_E 32_T 0.80 0.00
37_L 120_R 0.80 0.00
176_R 145_F 0.80 0.00
205_E 117_L 0.80 0.00
130_P 125_H 0.80 0.00
208_K 158_W 0.79 0.00
222_E 43_K 0.79 0.00
224_R 166_D 0.79 0.00
65_I 117_L 0.78 0.00
3_T 123_E 0.78 0.00
3_T 89_A 0.78 0.00
131_N 167_F 0.78 0.00
189_D 7_K 0.78 0.00
146_L 135_E 0.78 0.00
14_I 181_V 0.78 0.00
53_S 109_G 0.77 0.00
185_A 190_Y 0.77 0.00
100_D 112_F 0.77 0.00
87_I 117_L 0.77 0.00
182_V 128_P 0.77 0.00
209_I 31_K 0.76 0.00
154_A 49_V 0.76 0.00
176_R 22_L 0.76 0.00
160_P 5_I 0.76 0.00
143_E 145_F 0.75 0.00
83_K 87_P 0.75 0.00
53_S 73_K 0.75 0.00
67_A 104_I 0.75 0.00
109_I 25_A 0.75 0.00
216_S 171_T 0.75 0.00
26_D 106_L 0.75 0.00
216_S 40_L 0.75 0.00
109_I 74_G 0.75 0.00
30_S 119_T 0.74 0.00
109_I 184_V 0.74 0.00
149_L 79_Y 0.74 0.00
58_K 183_A 0.74 0.00
148_D 132_D 0.74 0.00
163_Q 164_G 0.74 0.00
166_P 156_A 0.74 0.00
209_I 85_D 0.74 0.00
158_K 107_L 0.74 0.00
78_M 104_I 0.74 0.00
150_C 87_P 0.74 0.00
212_D 109_G 0.74 0.00
222_E 48_Q 0.74 0.00
39_V 120_R 0.74 0.00
100_D 65_L 0.73 0.00
200_I 175_I 0.73 0.00
67_A 13_A 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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