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OPENSEQ.org
FLIA - YEDL
UniProt: P0AEM6 - P76319
Length: 398
Sequences: 415
Seq/Len: 1.11
I_Prob: 0.00
FLIA - RNA polymerase sigma factor for flagellar operon
Paralog alert: 0.76 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: FLIA RPOH RPOS 		YEDL - Uncharacterized N-acetyltransferase YedL
Paralog alert: 0.85 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
233_R 59_A 0.98 0.00
212_A 108_L 0.88 0.00
122_E 93_L 0.81 0.00
197_L 14_V 0.78 0.00
139_N 51_S 0.76 0.00
217_G 28_Q 0.74 0.00
196_V 93_L 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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