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OPENSEQ.org

BCP - YFGD
UniProt: P0AE52 - P76569
Length: 275
Sequences: 325
Seq/Len: 1.21
I_Prob: 0.00

BCP - Putative peroxiredoxin bcp
Paralog alert: 0.88 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
YFGD - Uncharacterized protein YfgD
Paralog alert: 0.78 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: ARSC YFFB YFGD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
125_L 8_Y 1.30 0.00
68_L 89_D 0.96 0.00
129_D 34_L 0.89 0.00
126_I 88_V 0.86 0.00
123_S 57_A 0.85 0.00
141_T 95_E 0.84 0.00
28_F 5_V 0.84 0.00
131_K 79_S 0.82 0.00
80_R 45_L 0.82 0.00
21_E 25_E 0.82 0.00
126_I 81_E 0.82 0.00
67_V 102_N 0.81 0.00
9_I 14_S 0.80 0.00
150_N 87_M 0.77 0.00
58_D 48_L 0.76 0.00
152_L 98_I 0.76 0.00
8_D 94_M 0.75 0.00
70_I 48_L 0.74 0.00
127_D 37_E 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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