May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

BCP - NRFG
UniProt: P0AE52 - P32712
Length: 354
Sequences: 306
Seq/Len: 0.96
I_Prob: 0.01

BCP - Putative peroxiredoxin bcp
Paralog alert: 0.88 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
NRFG - Formate-dependent nitrite reductase complex subunit NrfG
Paralog alert: 0.49 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_T 147_L 1.42 0.01
22_Q 174_N 1.32 0.00
124_F 80_G 1.32 0.00
126_I 71_Q 1.26 0.00
132_I 53_Q 1.19 0.00
135_V 168_Q 1.12 0.00
87_L 171_M 1.12 0.00
62_K 160_Y 1.10 0.00
126_I 139_L 1.09 0.00
90_T 116_V 1.09 0.00
38_Y 154_A 1.09 0.00
136_F 121_A 1.07 0.00
62_K 183_L 1.07 0.00
103_F 80_G 1.07 0.00
40_K 186_S 1.06 0.00
103_F 183_L 1.06 0.00
84_K 112_A 1.05 0.00
124_F 134_D 1.05 0.00
15_L 62_L 1.05 0.00
99_V 35_V 1.05 0.00
139_F 118_Y 1.03 0.00
68_L 88_D 1.02 0.00
143_N 96_Y 1.02 0.00
84_K 146_A 1.01 0.00
129_D 138_A 1.00 0.00
132_I 84_L 0.99 0.00
132_I 18_M 0.98 0.00
62_K 162_Q 0.97 0.00
95_E 168_Q 0.95 0.00
124_F 62_L 0.93 0.00
87_L 151_A 0.93 0.00
24_N 138_A 0.93 0.00
124_F 100_L 0.93 0.00
147_V 107_A 0.92 0.00
67_V 12_T 0.92 0.00
4_L 129_T 0.92 0.00
90_T 17_L 0.92 0.00
140_K 40_Q 0.91 0.00
71_S 65_K 0.91 0.00
50_A 132_M 0.91 0.00
125_L 94_L 0.91 0.00
72_T 149_L 0.90 0.00
99_V 144_I 0.90 0.00
70_I 180_R 0.90 0.00
132_I 98_Q 0.90 0.00
128_A 59_L 0.90 0.00
92_L 134_D 0.89 0.00
6_A 134_D 0.89 0.00
144_H 187_I 0.88 0.00
19_D 106_N 0.88 0.00
134_H 121_A 0.88 0.00
126_I 93_L 0.88 0.00
14_S 91_N 0.88 0.00
25_L 101_Q 0.87 0.00
103_F 148_M 0.87 0.00
77_K 151_A 0.87 0.00
83_E 176_P 0.87 0.00
40_K 105_E 0.86 0.00
76_E 36_R 0.86 0.00
31_Q 121_A 0.86 0.00
100_C 120_Q 0.85 0.00
148_V 128_Q 0.85 0.00
78_L 190_A 0.85 0.00
91_L 85_W 0.85 0.00
6_A 68_A 0.85 0.00
66_D 115_T 0.84 0.00
128_A 55_P 0.84 0.00
35_V 129_T 0.83 0.00
105_V 147_L 0.83 0.00
75_P 160_Y 0.83 0.00
120_H 150_L 0.82 0.00
129_D 159_N 0.82 0.00
124_F 103_R 0.82 0.00
7_G 183_L 0.82 0.00
51_C 176_P 0.82 0.00
26_T 15_T 0.82 0.00
74_K 15_T 0.81 0.00
97_H 147_L 0.81 0.00
35_V 15_T 0.81 0.00
145_H 135_K 0.81 0.00
136_F 183_L 0.80 0.00
125_L 21_L 0.79 0.00
100_C 133_I 0.79 0.00
145_H 168_Q 0.79 0.00
68_L 91_N 0.79 0.00
125_L 108_E 0.78 0.00
38_Y 81_E 0.78 0.00
132_I 41_R 0.78 0.00
101_E 32_W 0.78 0.00
30_G 109_L 0.78 0.00
126_I 95_A 0.77 0.00
10_A 135_K 0.77 0.00
120_H 115_T 0.77 0.00
24_N 127_A 0.77 0.00
44_P 80_G 0.77 0.00
63_A 109_L 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.5126 seconds.