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OPENSEQ.org

ARTM - CSPD
UniProt: P0AE30 - P0A968
Length: 296
Sequences: 371
Seq/Len: 1.31
I_Prob: 0.00

ARTM - Arginine ABC transporter permease protein ArtM
Paralog alert: 0.91 [within 20: 0.54] - ratio of genomes with paralogs
Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW
CSPD - Cold shock-like protein CspD
Paralog alert: 0.78 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: CSPA CSPB CSPC CSPD CSPE CSPF CSPG CSPH CSPI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
138_I 47_S 1.15 0.00
118_P 23_G 1.11 0.00
126_S 11_N 1.11 0.00
125_C 37_D 1.08 0.00
16_L 50_F 1.05 0.00
29_L 57_K 0.99 0.00
71_P 21_E 0.95 0.00
98_L 15_F 0.93 0.00
29_L 31_Y 0.90 0.00
25_V 40_R 0.89 0.00
61_L 19_C 0.89 0.00
117_I 47_S 0.88 0.00
130_M 22_G 0.88 0.00
148_L 37_D 0.87 0.00
65_F 27_I 0.86 0.00
16_L 15_F 0.86 0.00
116_A 47_S 0.85 0.00
50_G 40_R 0.83 0.00
61_L 15_F 0.82 0.00
154_E 15_F 0.81 0.00
168_I 60_H 0.79 0.00
116_A 57_K 0.79 0.00
205_T 57_K 0.78 0.00
131_S 37_D 0.78 0.00
170_L 15_F 0.77 0.00
47_L 51_D 0.77 0.00
31_L 49_Q 0.77 0.00
50_G 32_S 0.76 0.00
180_L 41_T 0.76 0.00
67_I 41_T 0.75 0.00
179_L 65_V 0.74 0.00
42_P 31_Y 0.74 0.00
119_E 25_E 0.73 0.00
138_I 8_W 0.72 0.00
195_I 53_H 0.72 0.00
213_R 20_P 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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