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OPENSEQ.org

MAP1 - UPPS
UniProt: P0AE18 - P60472
Length: 517
Sequences: 301
Seq/Len: 0.62
I_Prob: 0.00

MAP1 - Methionine aminopeptidase
Paralog alert: 0.96 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: AMPP MAP1 PEPQ YPDF
UPPS - Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)
Paralog alert: 0.11 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: UPPS
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
17_A 82_V 1.29 0.00
200_T 212_A 1.20 0.00
207_V 54_V 1.15 0.00
247_I 94_D 1.14 0.00
96_I 177_L 1.10 0.00
84_D 114_S 1.10 0.00
141_K 21_V 1.08 0.00
137_L 240_E 1.08 0.00
9_E 173_D 1.08 0.00
65_Y 172_I 1.08 0.00
133_L 62_I 1.04 0.00
44_I 129_A 1.02 0.00
10_D 59_N 1.02 0.00
100_V 101_H 1.02 0.00
94_V 220_L 1.02 0.00
8_P 129_A 1.01 0.00
67_K 233_L 0.98 0.00
40_E 225_D 0.94 0.00
141_K 33_K 0.94 0.00
200_T 192_V 0.94 0.00
242_D 240_E 0.94 0.00
197_P 105_V 0.93 0.00
189_R 189_V 0.92 0.00
197_P 99_S 0.92 0.00
77_V 236_F 0.92 0.00
10_D 223_D 0.91 0.00
77_V 126_K 0.91 0.00
251_R 165_G 0.90 0.00
36_V 114_S 0.89 0.00
1_M 158_L 0.89 0.00
197_P 192_V 0.89 0.00
119_T 84_A 0.88 0.00
96_I 48_K 0.88 0.00
257_P 218_D 0.88 0.00
36_V 135_T 0.88 0.00
36_V 132_A 0.88 0.00
148_E 189_V 0.87 0.00
9_E 169_P 0.87 0.00
197_P 218_D 0.87 0.00
130_Q 36_G 0.86 0.00
94_V 118_S 0.86 0.00
94_V 83_S 0.86 0.00
242_D 214_L 0.86 0.00
141_K 104_N 0.86 0.00
94_V 209_I 0.85 0.00
159_A 247_E 0.85 0.00
215_R 113_T 0.85 0.00
90_D 140_N 0.85 0.00
9_E 175_E 0.85 0.00
11_I 103_H 0.85 0.00
197_P 104_N 0.85 0.00
119_T 39_R 0.84 0.00
138_R 171_Q 0.84 0.00
162_F 51_R 0.84 0.00
75_E 120_L 0.83 0.00
214_I 21_V 0.83 0.00
127_R 175_E 0.83 0.00
83_D 64_A 0.83 0.00
105_F 128_E 0.82 0.00
203_I 45_A 0.82 0.00
207_V 23_I 0.81 0.00
54_H 228_D 0.81 0.00
132_S 29_G 0.81 0.00
128_I 158_L 0.81 0.00
119_T 29_G 0.81 0.00
43_R 104_N 0.81 0.00
83_D 181_V 0.81 0.00
200_T 47_A 0.80 0.00
126_C 236_F 0.80 0.00
48_Y 105_V 0.79 0.00
189_R 212_A 0.79 0.00
98_V 62_I 0.79 0.00
87_L 114_S 0.78 0.00
71_I 154_G 0.78 0.00
119_T 192_V 0.78 0.00
141_K 176_M 0.78 0.00
248_L 61_G 0.78 0.00
238_I 127_S 0.77 0.00
123_E 167_L 0.77 0.00
111_K 186_L 0.77 0.00
234_Y 68_Y 0.77 0.00
54_H 214_L 0.77 0.00
32_V 118_S 0.77 0.00
133_L 36_G 0.77 0.00
164_V 82_V 0.77 0.00
64_G 64_A 0.77 0.00
123_E 236_F 0.77 0.00
90_D 99_S 0.76 0.00
197_P 148_R 0.76 0.00
12_E 139_L 0.76 0.00
224_K 245_G 0.76 0.00
243_N 187_A 0.76 0.00
199_M 224_F 0.76 0.00
132_S 140_N 0.76 0.00
55_A 162_V 0.76 0.00
253_D 177_L 0.76 0.00
76_V 181_V 0.76 0.00
164_V 84_A 0.75 0.00
200_T 91_W 0.75 0.00
18_G 236_F 0.75 0.00
138_R 53_A 0.75 0.00
246_E 178_N 0.75 0.00
238_I 33_K 0.75 0.00
194_V 55_S 0.75 0.00
63_H 240_E 0.75 0.00
250_L 29_G 0.74 0.00
228_R 153_Q 0.74 0.00
188_S 115_R 0.74 0.00
29_E 104_N 0.74 0.00
135_L 95_S 0.74 0.00
253_D 152_V 0.74 0.00
132_S 37_K 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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