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OPENSEQ.org

RL14 - SECY
UniProt: P0ADY3 - P0AGA2
Length: 566
Sequences: 1028
Seq/Len: 1.86
I_Prob: 0.17

RL14 - 50S ribosomal protein L14
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL14
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
112_F 244_I 1.41 0.17
59_K 95_L 1.32 0.13
75_S 76_S 1.30 0.12
14_S 438_L 1.25 0.11
21_C 286_F 1.22 0.10
78_R 416_F 1.17 0.09
17_R 439_K 1.16 0.08
33_A 176_E 1.15 0.08
31_R 422_T 1.13 0.07
17_R 77_I 1.11 0.07
38_I 295_G 1.11 0.07
40_K 26_V 1.08 0.07
56_D 92_I 1.07 0.06
78_R 243_R 1.07 0.06
34_G 105_I 1.06 0.06
109_S 423_L 1.03 0.05
34_G 55_Q 1.03 0.05
112_F 92_I 1.02 0.05
14_S 52_L 1.00 0.05
17_R 309_Y 0.99 0.05
87_L 92_I 0.99 0.05
78_R 379_L 0.96 0.04
19_V 363_A 0.95 0.04
43_I 384_I 0.95 0.04
86_L 306_I 0.94 0.04
55_G 248_Y 0.94 0.04
120_P 179_T 0.93 0.04
23_K 168_T 0.93 0.04
6_T 394_A 0.93 0.04
38_I 397_V 0.93 0.04
81_G 234_V 0.92 0.04
7_M 97_V 0.92 0.04
86_L 202_A 0.92 0.04
39_I 366_I 0.91 0.04
91_S 35_I 0.91 0.04
66_K 216_H 0.91 0.03
6_T 341_E 0.90 0.03
41_I 87_S 0.90 0.03
18_R 433_L 0.90 0.03
47_I 368_K 0.90 0.03
104_T 411_V 0.90 0.03
31_R 181_R 0.89 0.03
47_I 371_T 0.89 0.03
77_I 433_L 0.89 0.03
38_I 360_E 0.89 0.03
116_I 126_V 0.89 0.03
39_I 176_E 0.88 0.03
66_K 77_I 0.88 0.03
111_K 246_V 0.88 0.03
46_A 350_G 0.88 0.03
110_E 420_V 0.88 0.03
21_C 327_F 0.88 0.03
72_P 256_R 0.87 0.03
88_N 164_L 0.87 0.03
99_I 269_V 0.87 0.03
14_S 66_M 0.87 0.03
77_I 422_T 0.86 0.03
38_I 147_G 0.86 0.03
62_V 301_N 0.85 0.03
62_V 179_T 0.85 0.03
57_V 113_R 0.85 0.03
90_N 91_I 0.85 0.03
39_I 172_M 0.85 0.03
99_I 283_I 0.85 0.03
20_M 17_G 0.85 0.03
29_H 53_L 0.84 0.03
109_S 151_N 0.84 0.03
78_R 245_V 0.84 0.03
50_G 65_N 0.84 0.03
39_I 28_G 0.84 0.03
99_I 423_L 0.83 0.03
103_V 431_S 0.83 0.03
9_N 323_S 0.83 0.03
17_R 318_V 0.83 0.03
86_L 50_A 0.83 0.03
17_R 256_R 0.83 0.03
42_T 425_M 0.82 0.03
43_I 440_G 0.82 0.03
30_R 61_I 0.82 0.03
72_P 28_G 0.82 0.03
104_T 72_L 0.82 0.02
89_N 360_E 0.82 0.02
20_M 125_L 0.82 0.02
70_R 51_K 0.81 0.02
112_F 366_I 0.81 0.02
19_V 137_T 0.81 0.02
17_R 293_W 0.81 0.02
66_K 225_V 0.81 0.02
30_R 39_I 0.81 0.02
45_E 265_L 0.81 0.02
33_A 250_K 0.81 0.02
111_K 171_L 0.81 0.02
50_G 27_I 0.81 0.02
123_L 128_A 0.81 0.02
14_S 394_A 0.81 0.02
35_V 233_F 0.81 0.02
78_R 410_V 0.81 0.02
86_L 230_V 0.81 0.02
47_I 232_F 0.81 0.02
19_V 292_S 0.81 0.02
4_E 267_L 0.81 0.02
35_V 330_F 0.80 0.02
86_L 334_A 0.80 0.02
29_H 174_L 0.80 0.02
70_R 315_P 0.80 0.02
17_R 289_T 0.80 0.02
19_V 307_S 0.79 0.02
112_F 306_I 0.79 0.02
84_C 88_A 0.79 0.02
66_K 233_F 0.79 0.02
114_K 294_F 0.79 0.02
99_I 148_L 0.79 0.02
31_R 50_A 0.79 0.02
35_V 88_A 0.79 0.02
47_I 417_M 0.78 0.02
66_K 39_I 0.78 0.02
55_G 403_G 0.78 0.02
78_R 35_I 0.78 0.02
84_C 117_S 0.78 0.02
43_I 7_L 0.78 0.02
89_N 378_A 0.78 0.02
104_T 413_I 0.78 0.02
72_P 50_A 0.78 0.02
84_C 103_A 0.78 0.02
39_I 407_L 0.77 0.02
10_V 82_I 0.77 0.02
110_E 368_K 0.77 0.02
115_I 172_M 0.77 0.02
86_L 393_D 0.76 0.02
38_I 319_L 0.76 0.02
62_V 62_E 0.76 0.02
111_K 335_L 0.76 0.02
17_R 99_H 0.76 0.02
123_L 45_D 0.76 0.02
66_K 174_L 0.75 0.02
78_R 148_L 0.75 0.02
2_I 429_Y 0.75 0.02
78_R 304_T 0.75 0.02
17_R 294_F 0.75 0.02
78_R 21_R 0.75 0.02
14_S 38_F 0.75 0.02
99_I 433_L 0.75 0.02
62_V 151_N 0.75 0.02
47_I 214_D 0.74 0.02
116_I 238_E 0.74 0.02
95_I 33_F 0.74 0.02
34_G 314_Q 0.74 0.02
77_I 222_L 0.74 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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