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OPENSEQ.org

FIME - HSLV
UniProt: P0ADH7 - P0A7B8
Length: 374
Sequences: 280
Seq/Len: 0.78
I_Prob: 0.01

FIME - Type 1 fimbriae regulatory protein FimE
Paralog alert: 0.88 [within 20: 0.27] - ratio of genomes with paralogs
Cluster includes: FIMB FIME INTA INTB INTD INTE INTF INTQ INTR INTS INTZ XERC XERD
HSLV - ATP-dependent protease subunit HslV
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HSLV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_D 50_G 1.51 0.01
32_I 43_V 1.41 0.00
159_Y 43_V 1.33 0.00
15_M 152_A 1.27 0.00
37_R 161_I 1.25 0.00
120_I 31_N 1.22 0.00
148_E 145_A 1.17 0.00
173_A 80_A 1.16 0.00
86_W 117_E 1.12 0.00
118_R 132_A 1.11 0.00
156_I 14_V 1.09 0.00
85_R 144_S 1.04 0.00
166_R 114_V 1.02 0.00
105_S 50_G 1.00 0.00
170_R 154_D 1.00 0.00
167_H 56_T 1.00 0.00
6_Y 22_T 0.99 0.00
127_A 95_L 0.99 0.00
187_N 160_C 0.98 0.00
53_L 35_V 0.97 0.00
103_F 152_A 0.95 0.00
53_L 96_L 0.95 0.00
63_R 155_I 0.95 0.00
50_Y 35_V 0.94 0.00
133_T 114_V 0.93 0.00
175_N 112_D 0.93 0.00
148_E 149_A 0.93 0.00
156_I 22_T 0.92 0.00
102_I 90_R 0.92 0.00
37_R 112_D 0.92 0.00
177_A 153_L 0.91 0.00
40_M 9_R 0.91 0.00
43_S 159_I 0.90 0.00
132_Q 35_V 0.90 0.00
175_N 51_T 0.90 0.00
78_D 68_H 0.88 0.00
54_D 1_M 0.88 0.00
123_A 39_Y 0.88 0.00
109_S 27_V 0.88 0.00
28_D 60_L 0.87 0.00
81_E 107_I 0.86 0.00
8_T 51_T 0.86 0.00
177_A 110_N 0.86 0.00
177_A 67_M 0.86 0.00
141_A 37_R 0.86 0.00
110_R 172_L 0.85 0.00
8_T 112_D 0.84 0.00
37_R 43_V 0.84 0.00
146_L 91_K 0.84 0.00
72_V 106_I 0.84 0.00
15_M 22_T 0.83 0.00
46_L 171_E 0.83 0.00
174_S 149_A 0.82 0.00
141_A 104_S 0.82 0.00
148_E 11_G 0.82 0.00
61_N 37_R 0.82 0.00
10_K 45_A 0.82 0.00
104_I 55_F 0.81 0.00
5_R 155_I 0.81 0.00
73_H 161_I 0.81 0.00
116_A 136_A 0.81 0.00
25_G 51_T 0.81 0.00
104_I 140_N 0.81 0.00
12_V 9_R 0.81 0.00
16_M 75_A 0.81 0.00
112_S 152_A 0.80 0.00
72_V 85_T 0.80 0.00
45_L 99_A 0.80 0.00
175_N 104_S 0.80 0.00
10_K 50_G 0.79 0.00
173_A 6_S 0.79 0.00
60_I 1_M 0.79 0.00
54_D 135_R 0.79 0.00
105_S 6_S 0.79 0.00
173_A 26_T 0.79 0.00
133_T 14_V 0.79 0.00
76_R 161_I 0.78 0.00
9_G 155_I 0.78 0.00
23_A 100_D 0.78 0.00
170_R 4_I 0.78 0.00
113_R 119_D 0.78 0.00
169_V 74_K 0.77 0.00
8_T 145_A 0.77 0.00
159_Y 145_A 0.77 0.00
63_R 37_R 0.76 0.00
14_A 66_E 0.76 0.00
165_I 161_I 0.76 0.00
7_L 152_A 0.76 0.00
37_R 80_A 0.76 0.00
100_D 142_E 0.76 0.00
6_Y 114_V 0.75 0.00
176_A 112_D 0.75 0.00
118_R 107_I 0.75 0.00
12_V 168_T 0.75 0.00
59_R 95_L 0.75 0.00
184_E 134_A 0.75 0.00
180_A 134_A 0.75 0.00
43_S 132_A 0.75 0.00
43_S 16_A 0.74 0.00
59_R 114_V 0.74 0.00
167_H 39_Y 0.74 0.00
173_A 28_M 0.74 0.00
63_R 5_V 0.74 0.00
144_Y 43_V 0.74 0.00
87_T 127_G 0.74 0.00
32_I 135_R 0.74 0.00
53_L 136_A 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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