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OPENSEQ.org

FTSI - RSMH
UniProt: P0AD68 - P60390
Length: 901
Sequences: 1172
Seq/Len: 1.38
I_Prob: 0.00

FTSI - Peptidoglycan synthase FtsI
Paralog alert: 0.81 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: FTSI PBP2
RSMH - Ribosomal RNA small subunit methyltransferase H
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
246_R 300_A 0.97 0.00
177_H 79_F 0.91 0.00
202_G 37_H 0.91 0.00
43_A 26_I 0.88 0.00
229_A 37_H 0.87 0.00
44_W 300_A 0.87 0.00
462_S 255_E 0.86 0.00
566_D 70_P 0.85 0.00
284_N 97_G 0.85 0.00
407_W 240_S 0.84 0.00
487_K 81_A 0.83 0.00
205_G 106_S 0.82 0.00
169_Y 200_P 0.80 0.00
498_A 159_R 0.80 0.00
447_T 291_E 0.78 0.00
424_T 248_I 0.78 0.00
409_D 241_F 0.78 0.00
332_I 53_A 0.76 0.00
483_K 290_G 0.76 0.00
492_A 87_A 0.76 0.00
196_F 237_S 0.76 0.00
341_I 135_S 0.76 0.00
121_L 82_L 0.74 0.00
159_I 237_S 0.74 0.00
279_P 79_F 0.74 0.00
178_L 58_P 0.73 0.00
420_G 30_G 0.73 0.00
474_V 102_L 0.73 0.00
348_S 309_E 0.72 0.00
362_V 100_L 0.72 0.00
430_R 300_A 0.71 0.00
151_I 177_M 0.70 0.00
411_E 241_F 0.70 0.00
471_M 291_E 0.70 0.00
144_N 102_L 0.70 0.00
442_R 152_L 0.70 0.00
271_E 138_E 0.70 0.00
308_T 178_T 0.69 0.00
431_V 199_H 0.69 0.00
284_N 112_A 0.69 0.00
465_R 94_K 0.68 0.00
264_L 191_T 0.68 0.00
305_P 37_H 0.68 0.00
72_G 37_H 0.68 0.00
532_I 142_T 0.68 0.00
499_K 300_A 0.68 0.00
212_D 241_F 0.67 0.00
236_I 253_M 0.67 0.00
522_S 66_T 0.67 0.00
505_G 79_F 0.67 0.00
355_V 151_V 0.67 0.00
128_I 17_N 0.67 0.00
123_Q 291_E 0.67 0.00
272_V 179_R 0.67 0.00
269_T 292_E 0.66 0.00
415_F 211_W 0.66 0.00
455_G 16_V 0.66 0.00
421_L 113_E 0.66 0.00
91_I 90_D 0.66 0.00
341_I 257_S 0.66 0.00
216_R 300_A 0.65 0.00
46_Q 308_A 0.65 0.00
428_L 169_V 0.65 0.00
97_E 135_S 0.65 0.00
247_E 16_V 0.65 0.00
419_Y 32_F 0.65 0.00
300_T 240_S 0.65 0.00
457_R 16_V 0.65 0.00
231_N 231_A 0.64 0.00
30_C 38_S 0.64 0.00
257_A 161_A 0.64 0.00
384_G 203_R 0.64 0.00
85_S 12_L 0.64 0.00
53_L 211_W 0.64 0.00
294_M 222_A 0.64 0.00
314_V 208_V 0.64 0.00
119_I 229_V 0.64 0.00
327_S 53_A 0.64 0.00
36_A 287_L 0.64 0.00
396_E 254_R 0.64 0.00
115_N 98_I 0.64 0.00
262_A 305_L 0.64 0.00
457_R 75_I 0.64 0.00
457_R 53_A 0.63 0.00
331_T 262_V 0.63 0.00
335_R 254_R 0.63 0.00
46_Q 99_L 0.63 0.00
143_V 254_R 0.63 0.00
76_D 158_E 0.63 0.00
528_L 248_I 0.63 0.00
362_V 140_L 0.63 0.00
481_G 191_T 0.63 0.00
151_I 238_I 0.63 0.00
90_A 303_S 0.63 0.00
358_K 289_P 0.62 0.00
216_R 186_V 0.62 0.00
460_P 87_A 0.62 0.00
98_V 95_I 0.62 0.00
37_F 175_Q 0.62 0.00
240_L 21_I 0.62 0.00
400_L 98_I 0.62 0.00
553_I 30_G 0.62 0.00
487_K 295_A 0.61 0.00
437_S 155_Y 0.61 0.00
169_Y 201_A 0.61 0.00
560_T 241_F 0.61 0.00
128_I 185_E 0.61 0.00
461_E 190_A 0.61 0.00
356_L 242_H 0.61 0.00
334_Y 162_K 0.61 0.00
152_K 138_E 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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