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OPENSEQ.org

ISPB - UBIG
UniProt: P0AD57 - P17993
Length: 563
Sequences: 361
Seq/Len: 0.69
I_Prob: 0.00

ISPB - Octaprenyl-diphosphate synthase
Paralog alert: 0.76 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ISPA ISPB
UBIG - 3-demethylubiquinone-9 3-methyltransferase
Paralog alert: 0.71 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
191_E 92_Q 1.33 0.00
252_A 122_Q 1.30 0.00
217_N 63_V 1.16 0.00
116_Y 31_E 1.14 0.00
21_I 37_L 1.11 0.00
251_Q 157_F 1.10 0.00
278_C 71_A 1.09 0.00
172_A 23_V 1.06 0.00
34_Q 137_D 1.06 0.00
111_V 86_M 1.05 0.00
279_G 42_P 1.04 0.00
73_I 60_V 1.04 0.00
312_I 150_K 1.02 0.00
92_M 71_A 1.01 0.00
17_V 105_V 0.98 0.00
17_V 108_V 0.98 0.00
206_A 24_A 0.97 0.00
308_R 114_E 0.97 0.00
28_D 92_Q 0.96 0.00
179_A 191_F 0.96 0.00
111_V 54_G 0.96 0.00
116_Y 156_F 0.95 0.00
189_T 126_V 0.95 0.00
146_E 70_L 0.94 0.00
197_Q 30_L 0.93 0.00
273_E 166_S 0.93 0.00
164_M 130_E 0.93 0.00
302_L 115_H 0.93 0.00
51_I 71_A 0.93 0.00
214_L 131_M 0.92 0.00
274_A 82_T 0.91 0.00
180_Q 24_A 0.91 0.00
286_Q 126_V 0.91 0.00
308_R 210_H 0.91 0.00
54_L 94_A 0.91 0.00
76_I 142_V 0.90 0.00
53_V 86_M 0.90 0.00
73_I 68_G 0.90 0.00
86_V 57_G 0.90 0.00
23_E 96_L 0.90 0.00
178_A 84_L 0.89 0.00
241_L 142_V 0.89 0.00
278_C 52_A 0.88 0.00
87_V 70_L 0.88 0.00
127_G 46_G 0.87 0.00
138_A 185_T 0.87 0.00
175_F 127_T 0.87 0.00
104_G 68_G 0.87 0.00
270_P 105_V 0.86 0.00
109_V 148_L 0.86 0.00
13_D 206_L 0.86 0.00
103_F 87_G 0.86 0.00
19_A 196_E 0.86 0.00
214_L 97_H 0.86 0.00
109_V 78_G 0.86 0.00
120_F 70_L 0.86 0.00
13_D 196_E 0.86 0.00
97_A 112_V 0.85 0.00
304_D 199_G 0.85 0.00
13_D 149_V 0.85 0.00
214_L 64_G 0.85 0.00
141_V 105_V 0.85 0.00
319_V 64_G 0.85 0.00
149_Q 83_G 0.84 0.00
120_F 97_H 0.84 0.00
259_I 63_V 0.83 0.00
62_E 68_G 0.83 0.00
304_D 150_K 0.83 0.00
293_D 196_E 0.83 0.00
149_Q 65_C 0.83 0.00
205_T 81_V 0.82 0.00
10_T 121_G 0.82 0.00
27_S 215_H 0.82 0.00
135_M 21_E 0.82 0.00
156_P 196_E 0.82 0.00
314_L 132_L 0.82 0.00
289_E 40_I 0.81 0.00
244_M 169_M 0.81 0.00
304_D 55_L 0.81 0.00
180_Q 204_T 0.81 0.00
272_L 211_I 0.81 0.00
268_L 56_F 0.80 0.00
132_L 118_K 0.80 0.00
46_R 78_G 0.80 0.00
278_C 73_S 0.80 0.00
278_C 69_I 0.79 0.00
55_A 57_G 0.79 0.00
11_A 25_S 0.79 0.00
42_G 144_A 0.79 0.00
280_S 107_Y 0.79 0.00
104_G 75_A 0.79 0.00
269_E 208_E 0.79 0.00
292_A 68_G 0.79 0.00
259_I 73_S 0.78 0.00
271_V 213_G 0.78 0.00
123_M 92_Q 0.78 0.00
71_A 91_L 0.78 0.00
47_I 211_I 0.78 0.00
280_S 126_V 0.78 0.00
90_S 24_A 0.78 0.00
102_A 137_D 0.77 0.00
303_P 203_Q 0.77 0.00
284_T 203_Q 0.77 0.00
286_Q 58_K 0.77 0.00
71_A 140_S 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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