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OPENSEQ.org

ISPB - YHBE
UniProt: P0AD57 - P0AA73
Length: 644
Sequences: 392
Seq/Len: 0.65
I_Prob: 0.00

ISPB - Octaprenyl-diphosphate synthase
Paralog alert: 0.76 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ISPA ISPB
YHBE - Uncharacterized inner membrane transporter YhbE
Paralog alert: 0.84 [within 20: 0.24] - ratio of genomes with paralogs
Cluster includes: EAMA RHTA YDDG YEDA YHBE YICL YIJE YTFF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_A 200_I 1.24 0.00
123_M 257_L 1.24 0.00
266_H 176_V 1.22 0.00
209_L 239_A 1.19 0.00
175_F 277_P 1.17 0.00
241_L 140_V 1.16 0.00
281_L 15_T 1.13 0.00
73_I 169_T 1.09 0.00
82_L 16_A 1.09 0.00
190_P 78_A 1.09 0.00
89_E 115_A 1.06 0.00
197_Q 173_S 1.06 0.00
241_L 74_L 1.04 0.00
300_Q 74_L 1.03 0.00
308_R 204_P 1.01 0.00
11_A 196_T 1.00 0.00
188_C 216_H 1.00 0.00
18_N 139_L 0.98 0.00
38_Y 107_L 0.97 0.00
138_A 165_V 0.96 0.00
186_A 110_V 0.95 0.00
75_F 259_T 0.94 0.00
71_A 165_V 0.93 0.00
241_L 135_L 0.93 0.00
161_E 207_K 0.93 0.00
52_A 224_F 0.92 0.00
17_V 241_A 0.92 0.00
273_E 48_I 0.92 0.00
184_I 61_P 0.92 0.00
137_E 119_I 0.91 0.00
12_Q 52_A 0.91 0.00
219_D 10_L 0.91 0.00
286_Q 130_V 0.90 0.00
67_V 289_V 0.90 0.00
69_I 121_K 0.88 0.00
295_A 243_W 0.87 0.00
259_I 263_S 0.87 0.00
294_K 265_L 0.87 0.00
184_I 230_L 0.87 0.00
153_V 76_A 0.87 0.00
293_D 296_Y 0.87 0.00
73_I 96_L 0.86 0.00
221_E 227_L 0.86 0.00
159_T 163_F 0.85 0.00
283_W 276_R 0.85 0.00
244_M 76_A 0.85 0.00
23_E 163_F 0.85 0.00
292_A 286_G 0.84 0.00
232_N 133_L 0.84 0.00
309_E 231_V 0.84 0.00
304_D 257_L 0.84 0.00
58_A 296_Y 0.84 0.00
50_M 255_T 0.84 0.00
96_K 141_M 0.83 0.00
38_Y 111_G 0.83 0.00
242_H 76_A 0.82 0.00
197_Q 257_L 0.82 0.00
114_F 50_L 0.82 0.00
299_L 126_S 0.82 0.00
104_G 109_P 0.82 0.00
50_M 92_S 0.82 0.00
165_R 101_S 0.81 0.00
175_F 25_A 0.81 0.00
306_P 48_I 0.81 0.00
119_A 98_P 0.81 0.00
318_A 21_A 0.81 0.00
199_Y 290_V 0.81 0.00
146_E 286_G 0.81 0.00
216_Y 33_M 0.81 0.00
184_I 52_A 0.80 0.00
73_I 125_R 0.80 0.00
72_L 112_M 0.80 0.00
12_Q 134_M 0.80 0.00
75_F 260_L 0.80 0.00
21_I 104_I 0.80 0.00
189_T 68_K 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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