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OPENSEQ.org

DEOR - YBJK
UniProt: P0ACK5 - P75811
Length: 430
Sequences: 463
Seq/Len: 1.09
I_Prob: 0.00

DEOR - Deoxyribose operon repressor
Paralog alert: 0.83 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: AGAR DEOR FUCR GATR GLPR SGCR SRLR ULAR YCIT YDJF YGBI YIHW
YBJK - Uncharacterized HTH-type transcriptional regulator YbjK
Paralog alert: 0.76 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_A 19_E 0.92 0.00
209_H 53_D 0.89 0.00
224_K 140_P 0.87 0.00
38_I 28_A 0.83 0.00
102_T 125_N 0.82 0.00
161_L 27_H 0.81 0.00
238_E 35_A 0.78 0.00
90_V 154_T 0.77 0.00
102_T 85_C 0.76 0.00
84_K 51_G 0.76 0.00
138_A 17_T 0.76 0.00
120_V 161_R 0.76 0.00
6_E 153_M 0.74 0.00
221_G 49_F 0.73 0.00
93_D 51_G 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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