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OPENSEQ.org

DBHB - FADM
UniProt: P0ACF4 - P77712
Length: 222
Sequences: 138
Seq/Len: 0.63
I_Prob: 0.00

DBHB - DNA-binding protein HU-beta
Paralog alert: 0.56 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: DBHA DBHB IHFA IHFB
FADM - Long-chain acyl-CoA thioesterase FadM
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FADM YBGC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
30_A 33_D 1.20 0.00
80_R 22_R 1.16 0.00
84_A 12_L 1.12 0.00
82_G 56_I 1.05 0.00
25_L 41_F 1.04 0.00
30_A 74_S 1.04 0.00
28_I 89_V 1.03 0.00
40_D 90_I 1.02 0.00
40_D 121_G 1.00 0.00
44_L 23_Y 1.00 0.00
82_G 24_L 0.98 0.00
29_I 108_C 0.94 0.00
57_A 124_R 0.94 0.00
34_E 47_H 0.93 0.00
15_D 72_I 0.92 0.00
40_D 107_V 0.91 0.00
9_K 55_N 0.90 0.00
29_I 112_K 0.89 0.00
66_G 120_E 0.89 0.00
45_V 23_Y 0.88 0.00
85_L 70_L 0.86 0.00
84_A 78_Q 0.86 0.00
32_V 3_T 0.85 0.00
32_V 79_L 0.85 0.00
58_R 60_Y 0.85 0.00
81_A 74_S 0.84 0.00
38_E 39_D 0.83 0.00
4_S 60_Y 0.83 0.00
73_A 78_Q 0.83 0.00
89_V 28_E 0.82 0.00
16_I 16_Q 0.81 0.00
38_E 109_I 0.81 0.00
42_V 110_D 0.80 0.00
81_A 125_E 0.80 0.00
57_A 92_L 0.80 0.00
25_L 86_L 0.80 0.00
41_D 39_D 0.79 0.00
28_I 73_T 0.77 0.00
41_D 22_R 0.76 0.00
60_G 106_F 0.76 0.00
49_T 52_V 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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