May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DHPS - GLMM
UniProt: P0AC13 - P31120
Length: 727
Sequences: 431
Seq/Len: 0.60
I_Prob: 0.00

DHPS - Dihydropteroate synthase
Paralog alert: 0.13 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: DHPS
GLMM - Phosphoglucosamine mutase
Paralog alert: 0.93 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: GLMM MANB PGM
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_V 194_L 1.17 0.00
200_L 57_M 1.15 0.00
57_V 235_D 1.14 0.00
71_V 331_I 1.11 0.00
119_S 354_R 1.11 0.00
119_S 28_K 1.09 0.00
222_S 98_V 1.09 0.00
83_E 151_I 1.08 0.00
172_C 28_K 1.08 0.00
102_V 176_K 1.08 0.00
214_L 361_D 1.07 0.00
216_V 151_I 1.05 0.00
184_L 194_L 1.05 0.00
99_K 331_I 1.04 0.00
85_I 194_L 1.02 0.00
160_E 227_A 1.01 0.00
55_I 389_E 1.01 0.00
172_C 226_Q 1.00 0.00
17_V 442_V 1.00 0.00
20_I 176_K 1.00 0.00
173_E 403_G 0.99 0.00
268_V 302_A 0.97 0.00
57_V 215_A 0.97 0.00
194_L 408_V 0.96 0.00
92_W 228_R 0.96 0.00
103_I 279_G 0.96 0.00
138_L 408_V 0.95 0.00
117_I 364_S 0.95 0.00
43_H 165_T 0.94 0.00
134_L 97_I 0.94 0.00
93_I 176_K 0.94 0.00
138_L 216_E 0.93 0.00
54_I 388_H 0.93 0.00
46_L 209_N 0.93 0.00
16_H 76_T 0.92 0.00
98_S 98_V 0.91 0.00
184_L 408_V 0.91 0.00
119_S 244_G 0.91 0.00
47_M 418_L 0.91 0.00
76_Q 397_E 0.91 0.00
82_V 89_R 0.91 0.00
134_L 257_V 0.90 0.00
216_V 106_F 0.90 0.00
106_S 37_L 0.90 0.00
249_Q 316_Q 0.89 0.00
204_L 244_G 0.88 0.00
55_I 441_A 0.88 0.00
198_Y 438_I 0.88 0.00
146_K 37_L 0.88 0.00
207_F 432_T 0.88 0.00
57_V 202_I 0.88 0.00
236_L 298_G 0.87 0.00
251_A 219_A 0.87 0.00
207_F 209_N 0.87 0.00
238_G 286_S 0.87 0.00
105_E 84_V 0.87 0.00
183_L 217_V 0.87 0.00
82_V 389_E 0.86 0.00
99_K 26_V 0.86 0.00
237_S 408_V 0.86 0.00
156_D 183_N 0.86 0.00
261_E 369_F 0.85 0.00
182_L 124_A 0.85 0.00
68_E 72_S 0.85 0.00
238_G 289_G 0.85 0.00
137_C 113_F 0.84 0.00
267_R 418_L 0.84 0.00
66_A 442_V 0.84 0.00
95_V 164_A 0.84 0.00
133_G 240_F 0.84 0.00
126_L 373_L 0.84 0.00
161_V 57_M 0.83 0.00
82_V 433_E 0.83 0.00
191_G 248_I 0.83 0.00
135_P 66_L 0.83 0.00
100_P 263_M 0.83 0.00
95_V 43_R 0.83 0.00
216_V 219_A 0.82 0.00
214_L 128_A 0.82 0.00
198_Y 331_I 0.82 0.00
228_L 265_I 0.82 0.00
232_P 135_K 0.82 0.00
66_A 33_A 0.82 0.00
126_L 68_A 0.81 0.00
244_V 84_V 0.81 0.00
113_I 106_F 0.81 0.00
181_K 247_V 0.81 0.00
99_K 37_L 0.81 0.00
6_Q 352_M 0.81 0.00
242_C 289_G 0.80 0.00
53_T 268_R 0.80 0.00
34_H 305_K 0.80 0.00
41_V 377_R 0.80 0.00
16_H 91_F 0.80 0.00
39_D 211_V 0.80 0.00
174_Q 233_K 0.79 0.00
16_H 353_A 0.79 0.00
107_A 97_I 0.79 0.00
17_V 203_A 0.79 0.00
43_H 195_R 0.79 0.00
92_W 71_L 0.79 0.00
17_V 142_S 0.79 0.00
10_L 247_V 0.79 0.00
224_I 289_G 0.79 0.00
122_E 26_V 0.79 0.00
105_E 91_F 0.79 0.00
248_M 147_K 0.79 0.00
50_A 344_A 0.79 0.00
103_I 315_M 0.78 0.00
136_V 171_S 0.78 0.00
138_L 133_M 0.78 0.00
89_F 46_I 0.78 0.00
239_S 162_C 0.78 0.00
222_S 435_A 0.78 0.00
198_Y 139_C 0.78 0.00
178_A 317_E 0.78 0.00
261_E 231_A 0.78 0.00
117_I 263_M 0.78 0.00
228_L 91_F 0.78 0.00
47_M 297_L 0.77 0.00
95_V 38_A 0.77 0.00
20_I 175_L 0.77 0.00
137_C 58_L 0.77 0.00
177_I 230_L 0.77 0.00
95_V 410_L 0.77 0.00
164_Y 34_G 0.77 0.00
85_I 91_F 0.76 0.00
103_I 280_A 0.76 0.00
218_M 16_V 0.76 0.00
104_R 200_N 0.76 0.00
95_V 35_K 0.76 0.00
14_H 356_H 0.76 0.00
92_W 333_L 0.76 0.00
114_I 268_R 0.76 0.00
241_A 393_A 0.76 0.00
198_Y 94_E 0.76 0.00
105_E 4_R 0.76 0.00
57_V 200_N 0.75 0.00
172_C 244_G 0.75 0.00
47_M 133_M 0.75 0.00
223_M 418_L 0.75 0.00
57_V 425_G 0.75 0.00
131_E 404_N 0.75 0.00
15_P 47_I 0.75 0.00
155_D 107_Y 0.74 0.00
122_E 438_I 0.74 0.00
164_Y 113_F 0.74 0.00
86_A 426_E 0.74 0.00
203_R 238_I 0.74 0.00
232_P 305_K 0.74 0.00
23_V 231_A 0.74 0.00
202_A 324_A 0.74 0.00
141_M 140_V 0.74 0.00
47_M 317_E 0.74 0.00
20_I 385_P 0.74 0.00
99_K 352_M 0.74 0.00
54_I 106_F 0.73 0.00
18_M 22_T 0.73 0.00
117_I 188_H 0.73 0.00
184_L 434_F 0.73 0.00
138_L 347_Q 0.73 0.00
20_I 378_Y 0.73 0.00
21_L 30_G 0.73 0.00
109_V 333_L 0.73 0.00
224_I 286_S 0.73 0.00
72_E 179_V 0.73 0.00
188_F 139_C 0.73 0.00
135_P 27_L 0.73 0.00
272_T 262_I 0.73 0.00
244_V 26_V 0.72 0.00
83_E 95_A 0.72 0.00
169_I 179_V 0.72 0.00
246_A 400_A 0.72 0.00
229_N 223_R 0.72 0.00
103_I 69_A 0.72 0.00
100_P 319_G 0.72 0.00
48_I 192_N 0.72 0.00
203_R 429_A 0.72 0.00
44_A 167_P 0.72 0.00
253_I 320_W 0.72 0.00
155_D 392_K 0.72 0.00
167_E 194_L 0.72 0.00
47_M 236_L 0.72 0.00
15_P 334_D 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 3.5408 seconds.