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OPENSEQ.org

KDSC - LPTC
UniProt: P0ABZ4 - P0ADV9
Length: 379
Sequences: 258
Seq/Len: 0.71
I_Prob: 0.01

KDSC - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: KDSC
LPTC - Lipopolysaccharide export system protein LptC
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LPTC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_I 60_Y 1.62 0.01
109_L 167_L 1.38 0.01
142_V 129_I 1.33 0.01
180_L 83_L 1.32 0.01
161_G 177_K 1.32 0.01
123_V 145_S 1.31 0.01
31_L 119_A 1.29 0.01
105_A 79_T 1.24 0.01
157_T 182_Y 1.24 0.01
178_G 80_Q 1.21 0.01
152_R 166_N 1.21 0.01
42_I 138_L 1.18 0.00
146_H 42_Y 1.15 0.00
178_G 91_I 1.14 0.00
42_I 137_N 1.14 0.00
137_G 62_L 1.14 0.00
166_V 111_L 1.14 0.00
27_R 113_G 1.14 0.00
137_G 136_I 1.12 0.00
91_G 134_A 1.11 0.00
142_V 153_G 1.11 0.00
31_L 47_T 1.10 0.00
142_V 52_Y 1.09 0.00
31_L 103_L 1.09 0.00
116_A 89_D 1.08 0.00
21_A 30_T 1.06 0.00
101_N 163_M 1.06 0.00
9_A 9_I 1.06 0.00
107_S 114_H 1.05 0.00
118_E 53_N 1.03 0.00
138_L 169_S 1.03 0.00
27_R 32_Q 1.02 0.00
50_E 64_A 1.02 0.00
139_S 148_L 1.01 0.00
113_L 67_V 1.00 0.00
18_D 88_K 1.00 0.00
143_A 71_S 1.00 0.00
95_L 111_L 1.00 0.00
83_V 13_S 0.99 0.00
109_L 81_P 0.99 0.00
29_L 103_L 0.99 0.00
121_A 137_N 0.98 0.00
62_I 101_A 0.98 0.00
64_C 180_T 0.98 0.00
73_A 98_A 0.98 0.00
103_L 50_L 0.97 0.00
87_C 6_R 0.97 0.00
176_A 83_L 0.97 0.00
37_L 47_T 0.96 0.00
42_I 101_A 0.95 0.00
85_D 160_G 0.95 0.00
160_A 101_A 0.95 0.00
45_G 40_P 0.95 0.00
82_L 143_V 0.95 0.00
38_S 138_L 0.94 0.00
136_V 179_R 0.94 0.00
55_N 101_A 0.94 0.00
62_I 132_D 0.94 0.00
22_K 173_E 0.94 0.00
27_R 87_D 0.93 0.00
48_G 174_L 0.93 0.00
175_L 145_S 0.92 0.00
173_L 97_K 0.92 0.00
38_S 119_A 0.91 0.00
51_L 52_Y 0.91 0.00
87_C 47_T 0.91 0.00
153_A 163_M 0.91 0.00
53_A 98_A 0.91 0.00
26_I 124_S 0.91 0.00
82_L 44_S 0.90 0.00
95_L 58_L 0.90 0.00
20_I 64_A 0.90 0.00
142_V 49_T 0.90 0.00
100_S 58_L 0.89 0.00
136_V 159_S 0.89 0.00
37_L 127_R 0.88 0.00
120_V 87_D 0.88 0.00
44_M 160_G 0.88 0.00
94_H 174_L 0.88 0.00
42_I 139_V 0.88 0.00
91_G 143_V 0.87 0.00
76_T 114_H 0.87 0.00
69_D 144_T 0.87 0.00
56_V 52_Y 0.87 0.00
154_D 33_V 0.87 0.00
29_L 78_F 0.87 0.00
22_K 33_V 0.87 0.00
101_N 64_A 0.87 0.00
65_A 136_I 0.86 0.00
101_N 2_S 0.86 0.00
145_A 51_V 0.86 0.00
17_A 80_Q 0.86 0.00
144_D 42_Y 0.86 0.00
138_L 131_T 0.86 0.00
57_R 131_T 0.85 0.00
76_T 138_L 0.85 0.00
172_L 143_V 0.85 0.00
177_Q 174_L 0.85 0.00
31_L 78_F 0.84 0.00
56_V 58_L 0.84 0.00
24_E 13_S 0.84 0.00
21_A 59_S 0.84 0.00
24_E 79_T 0.84 0.00
55_N 170_K 0.84 0.00
41_L 46_H 0.84 0.00
157_T 150_T 0.84 0.00
47_N 11_V 0.84 0.00
38_S 10_I 0.84 0.00
137_G 179_R 0.83 0.00
42_I 119_A 0.83 0.00
121_A 140_T 0.83 0.00
26_I 130_T 0.83 0.00
79_K 180_T 0.83 0.00
99_Q 156_F 0.83 0.00
74_I 133_N 0.83 0.00
118_E 67_V 0.82 0.00
99_Q 101_A 0.82 0.00
50_E 76_S 0.82 0.00
115_I 22_I 0.82 0.00
29_L 156_F 0.82 0.00
31_L 74_A 0.82 0.00
43_Y 149_V 0.82 0.00
49_E 78_F 0.82 0.00
49_E 40_P 0.82 0.00
178_G 66_H 0.82 0.00
8_L 33_V 0.82 0.00
19_V 185_Q 0.82 0.00
177_Q 92_P 0.81 0.00
62_I 5_R 0.81 0.00
148_L 69_Y 0.81 0.00
111_E 88_K 0.81 0.00
29_L 137_N 0.81 0.00
143_A 159_S 0.81 0.00
19_V 184_I 0.81 0.00
171_D 124_S 0.81 0.00
56_V 73_Q 0.81 0.00
153_A 49_T 0.81 0.00
137_G 61_R 0.81 0.00
25_N 106_D 0.81 0.00
104_I 74_A 0.80 0.00
172_L 66_H 0.80 0.00
142_V 95_S 0.80 0.00
127_L 180_T 0.80 0.00
121_A 139_V 0.80 0.00
55_N 76_S 0.80 0.00
106_F 69_Y 0.80 0.00
51_L 153_G 0.80 0.00
23_A 53_N 0.80 0.00
139_S 33_V 0.80 0.00
133_M 54_P 0.79 0.00
169_V 119_A 0.79 0.00
117_P 151_L 0.79 0.00
57_R 153_G 0.79 0.00
92_I 60_Y 0.79 0.00
155_Y 163_M 0.79 0.00
180_L 68_E 0.79 0.00
90_L 12_L 0.79 0.00
41_L 47_T 0.79 0.00
154_D 97_K 0.79 0.00
130_W 160_G 0.79 0.00
180_L 131_T 0.79 0.00
38_S 47_T 0.78 0.00
109_L 121_V 0.78 0.00
65_A 119_A 0.78 0.00
173_L 83_L 0.78 0.00
176_A 145_S 0.78 0.00
110_L 14_L 0.78 0.00
172_L 42_Y 0.78 0.00
17_A 169_S 0.78 0.00
143_A 16_V 0.78 0.00
72_V 182_Y 0.78 0.00
51_L 58_L 0.78 0.00
24_E 45_E 0.78 0.00
18_D 148_L 0.78 0.00
181_D 34_V 0.77 0.00
87_C 94_W 0.77 0.00
55_N 95_S 0.77 0.00
8_L 72_D 0.77 0.00
158_R 55_E 0.77 0.00
72_V 129_I 0.77 0.00
80_A 69_Y 0.77 0.00
115_I 27_K 0.77 0.00
30_I 67_V 0.77 0.00
128_I 110_Y 0.77 0.00
9_A 139_V 0.77 0.00
70_I 37_N 0.77 0.00
46_N 131_T 0.77 0.00
23_A 101_A 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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