May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

TOLQ - YBGC
UniProt: P0ABU9 - P0A8Z3
Length: 364
Sequences: 402
Seq/Len: 1.15
I_Prob: 0.01

TOLQ - Protein TolQ
Paralog alert: 0.78 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: EXBB TOLQ
YBGC - Acyl-CoA thioester hydrolase YbgC
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FADM YBGC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
25_I 120_K 1.40 0.01
82_I 104_L 1.28 0.01
172_A 40_L 1.19 0.01
42_L 105_N 1.13 0.01
122_N 128_I 1.11 0.01
6_I 71_R 1.08 0.01
201_K 47_Q 1.07 0.01
27_F 123_A 1.06 0.01
129_F 38_E 1.06 0.01
7_L 115_D 1.06 0.01
152_A 120_K 1.05 0.00
152_A 122_R 1.02 0.00
49_A 106_E 1.01 0.00
152_A 78_I 1.01 0.00
172_A 47_Q 1.00 0.00
140_I 14_Y 0.97 0.00
128_P 31_F 0.97 0.00
18_K 101_N 0.96 0.00
154_I 128_I 0.95 0.00
9_L 94_Q 0.95 0.00
108_A 64_V 0.94 0.00
82_I 102_T 0.93 0.00
151_H 73_D 0.93 0.00
55_K 71_R 0.93 0.00
127_I 27_S 0.92 0.00
19_L 79_Q 0.92 0.00
140_I 79_Q 0.91 0.00
69_S 85_M 0.91 0.00
172_A 76_L 0.91 0.00
147_W 15_E 0.91 0.00
33_A 132_F 0.90 0.00
18_K 109_V 0.90 0.00
5_N 30_A 0.90 0.00
199_V 107_A 0.90 0.00
152_A 113_C 0.89 0.00
110_R 20_G 0.89 0.00
179_A 112_V 0.89 0.00
98_S 126_K 0.88 0.00
17_V 94_Q 0.88 0.00
184_A 70_A 0.88 0.00
114_I 27_S 0.88 0.00
213_F 59_V 0.88 0.00
22_L 106_E 0.88 0.00
189_V 124_L 0.87 0.00
129_F 72_L 0.87 0.00
16_L 51_M 0.87 0.00
11_L 131_E 0.86 0.00
18_K 25_H 0.86 0.00
140_I 112_V 0.86 0.00
5_N 124_L 0.85 0.00
196_N 43_H 0.85 0.00
105_V 30_A 0.84 0.00
147_W 27_S 0.83 0.00
199_V 89_S 0.83 0.00
132_T 53_E 0.83 0.00
97_N 96_I 0.83 0.00
162_A 14_Y 0.83 0.00
114_I 30_A 0.83 0.00
42_L 40_L 0.83 0.00
109_S 114_V 0.82 0.00
47_R 84_S 0.82 0.00
19_L 77_E 0.82 0.00
54_D 19_A 0.81 0.00
48_E 96_I 0.81 0.00
47_R 25_H 0.81 0.00
163_T 29_V 0.81 0.00
190_M 107_A 0.80 0.00
157_G 22_V 0.80 0.00
22_L 81_E 0.80 0.00
140_I 82_I 0.80 0.00
51_A 10_V 0.80 0.00
152_A 52_A 0.79 0.00
165_Q 67_Y 0.79 0.00
197_Q 119_M 0.79 0.00
160_K 86_R 0.79 0.00
95_R 85_M 0.79 0.00
128_P 35_A 0.79 0.00
77_T 39_M 0.79 0.00
69_S 39_M 0.79 0.00
183_F 86_R 0.79 0.00
48_E 107_A 0.78 0.00
10_F 80_T 0.78 0.00
137_S 58_V 0.78 0.00
210_M 101_N 0.78 0.00
162_A 87_G 0.78 0.00
75_N 49_A 0.77 0.00
18_K 66_Y 0.77 0.00
154_I 113_C 0.77 0.00
157_G 131_E 0.77 0.00
112_M 70_A 0.77 0.00
10_F 130_A 0.76 0.00
199_V 112_V 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.1552 seconds.