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OPENSEQ.org

PRIM - RS21
UniProt: P0ABS5 - P68679
Length: 652
Sequences: 412
Seq/Len: 0.63
I_Prob: 0.02

PRIM - DNA primase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PRIM
RS21 - 30S ribosomal protein S21
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS21
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
187_M 48_A 1.70 0.02
47_T 31_E 1.45 0.01
187_M 43_T 1.36 0.01
55_E 59_K 1.35 0.01
227_T 13_D 1.34 0.01
47_T 61_A 1.32 0.01
281_A 13_D 1.22 0.01
204_V 28_V 1.21 0.01
194_G 6_V 1.17 0.01
46_K 32_V 1.15 0.01
293_H 25_K 1.13 0.01
396_L 7_R 1.12 0.00
117_Y 23_C 1.10 0.00
201_R 47_R 1.09 0.00
58_F 13_D 1.08 0.00
21_D 68_T 1.07 0.00
18_D 45_R 1.07 0.00
313_A 26_A 1.05 0.00
239_F 21_R 1.05 0.00
123_L 48_A 1.05 0.00
332_G 70_L 1.04 0.00
500_T 67_R 1.03 0.00
93_H 51_S 1.02 0.00
35_N 36_E 1.02 0.00
86_V 48_A 1.01 0.00
288_S 48_A 1.00 0.00
578_L 34_R 0.99 0.00
238_I 48_A 0.98 0.00
247_G 24_E 0.98 0.00
72_D 7_R 0.98 0.00
267_Y 30_A 0.98 0.00
60_H 7_R 0.98 0.00
20_V 45_R 0.96 0.00
415_L 29_L 0.95 0.00
290_T 65_A 0.95 0.00
194_G 28_V 0.94 0.00
26_R 71_Y 0.94 0.00
148_L 55_R 0.94 0.00
511_N 60_L 0.94 0.00
219_G 14_V 0.94 0.00
454_L 31_E 0.93 0.00
18_D 18_R 0.93 0.00
204_V 37_F 0.93 0.00
69_N 32_V 0.93 0.00
7_R 58_K 0.92 0.00
113_R 16_L 0.92 0.00
117_Y 26_A 0.92 0.00
264_V 23_C 0.92 0.00
313_A 32_V 0.92 0.00
120_M 42_T 0.91 0.00
271_V 65_A 0.90 0.00
244_Q 47_R 0.90 0.00
239_F 52_A 0.90 0.00
407_L 14_V 0.90 0.00
53_N 14_V 0.89 0.00
273_L 8_E 0.89 0.00
371_F 64_N 0.89 0.00
187_M 61_A 0.89 0.00
77_Y 47_R 0.89 0.00
30_K 7_R 0.88 0.00
188_L 48_A 0.88 0.00
548_E 38_Y 0.88 0.00
46_K 22_S 0.88 0.00
462_P 24_E 0.88 0.00
165_W 59_K 0.88 0.00
290_T 66_R 0.87 0.00
197_Y 47_R 0.87 0.00
70_A 11_P 0.87 0.00
288_S 43_T 0.87 0.00
195_R 37_F 0.87 0.00
126_F 5_K 0.87 0.00
307_C 21_R 0.86 0.00
349_L 59_K 0.86 0.00
79_K 26_A 0.86 0.00
267_Y 24_E 0.85 0.00
365_A 26_A 0.85 0.00
54_G 22_S 0.85 0.00
498_L 28_V 0.85 0.00
59_Y 4_I 0.85 0.00
5_I 5_K 0.84 0.00
267_Y 5_K 0.84 0.00
246_Y 2_P 0.83 0.00
546_L 31_E 0.83 0.00
130_S 51_S 0.83 0.00
320_R 70_L 0.83 0.00
344_E 12_F 0.83 0.00
26_R 69_R 0.83 0.00
70_A 38_Y 0.82 0.00
278_I 59_K 0.82 0.00
28_K 22_S 0.82 0.00
155_R 59_K 0.82 0.00
297_L 51_S 0.82 0.00
51_T 14_V 0.82 0.00
92_M 13_D 0.82 0.00
362_M 57_A 0.81 0.00
247_G 2_P 0.81 0.00
519_L 23_C 0.81 0.00
295_Q 49_K 0.81 0.00
256_A 61_A 0.81 0.00
316_D 65_A 0.81 0.00
148_L 13_D 0.80 0.00
204_V 21_R 0.80 0.00
178_N 38_Y 0.80 0.00
255_N 25_K 0.80 0.00
308_Y 7_R 0.80 0.00
382_L 38_Y 0.80 0.00
307_C 33_R 0.80 0.00
219_G 24_E 0.79 0.00
344_E 24_E 0.79 0.00
89_L 47_R 0.79 0.00
551_Q 57_A 0.79 0.00
285_L 3_V 0.79 0.00
231_L 30_A 0.79 0.00
69_N 5_K 0.79 0.00
406_T 13_D 0.79 0.00
13_L 42_T 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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