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OPENSEQ.org

CCMD - DSBE
UniProt: P0ABM5 - P0AA86
Length: 254
Sequences: 172
Seq/Len: 0.69
I_Prob: 0.01

CCMD - Heme exporter protein D
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CCMD
DSBE - Thiol:disulfide interchange protein DsbE
Paralog alert: 0.18 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
20_F 121_N 1.59 0.01
5_F 136_L 1.45 0.01
26_V 67_Q 1.42 0.01
18_A 162_D 1.41 0.01
5_F 143_A 1.31 0.00
6_A 17_A 1.29 0.00
19_F 151_G 1.29 0.00
44_R 154_I 1.28 0.00
57_E 154_I 1.27 0.00
24_A 170_E 1.26 0.00
5_F 168_W 1.26 0.00
34_V 58_Q 1.24 0.00
24_A 41_I 1.22 0.00
23_L 160_A 1.21 0.00
5_F 39_A 1.20 0.00
16_G 53_L 1.19 0.00
23_L 151_G 1.16 0.00
20_F 175_L 1.13 0.00
30_I 152_N 1.13 0.00
5_F 134_L 1.11 0.00
45_A 49_R 1.11 0.00
33_V 2_K 1.10 0.00
56_R 65_L 1.09 0.00
5_F 78_T 1.08 0.00
33_V 173_K 1.08 0.00
12_F 157_Y 1.07 0.00
43_H 94_S 1.07 0.00
1_M 179_Y 1.07 0.00
37_V 10_L 1.06 0.00
5_F 138_L 1.05 0.00
18_A 133_M 1.04 0.00
39_S 127_L 1.04 0.00
35_L 158_R 1.04 0.00
13_A 149_I 1.04 0.00
32_L 65_L 1.03 0.00
51_A 2_K 1.00 0.00
47_L 14_L 1.00 0.00
10_E 12_I 1.00 0.00
3_P 179_Y 0.99 0.00
11_F 147_F 0.99 0.00
10_E 152_N 0.97 0.00
4_A 179_Y 0.97 0.00
39_S 37_E 0.96 0.00
27_M 63_D 0.96 0.00
13_A 98_I 0.96 0.00
43_H 15_A 0.95 0.00
62_A 29_E 0.94 0.00
37_V 41_I 0.94 0.00
33_V 118_E 0.94 0.00
18_A 120_G 0.93 0.00
20_F 81_P 0.93 0.00
8_W 178_K 0.93 0.00
51_A 147_F 0.92 0.00
36_V 55_N 0.91 0.00
53_Q 104_N 0.91 0.00
17_Y 162_D 0.91 0.00
18_A 131_D 0.91 0.00
62_A 22_W 0.91 0.00
15_G 13_F 0.90 0.00
18_A 56_P 0.90 0.00
23_L 78_T 0.90 0.00
40_V 121_N 0.90 0.00
10_E 155_I 0.89 0.00
12_F 163_L 0.89 0.00
52_Q 43_K 0.89 0.00
49_G 77_A 0.89 0.00
26_V 124_A 0.89 0.00
18_A 51_E 0.89 0.00
39_S 89_Y 0.89 0.00
3_P 163_L 0.88 0.00
49_G 169_E 0.88 0.00
24_A 88_Q 0.88 0.00
59_R 82_T 0.87 0.00
63_A 49_R 0.86 0.00
59_R 162_D 0.86 0.00
44_R 118_E 0.85 0.00
18_A 130_G 0.85 0.00
32_L 52_S 0.85 0.00
47_L 19_A 0.85 0.00
59_R 24_L 0.84 0.00
64_Q 58_Q 0.84 0.00
4_A 19_A 0.84 0.00
56_R 143_A 0.84 0.00
19_F 69_K 0.84 0.00
19_F 160_A 0.83 0.00
43_H 12_I 0.83 0.00
40_V 18_A 0.83 0.00
33_V 15_A 0.83 0.00
41_M 178_K 0.83 0.00
67_E 16_I 0.83 0.00
10_E 113_I 0.82 0.00
37_V 60_Y 0.82 0.00
56_R 91_N 0.82 0.00
43_H 56_P 0.82 0.00
10_E 67_Q 0.82 0.00
15_G 147_F 0.81 0.00
8_W 157_Y 0.81 0.00
59_R 81_P 0.81 0.00
34_V 5_V 0.81 0.00
56_R 85_A 0.80 0.00
37_V 166_R 0.80 0.00
28_T 24_L 0.80 0.00
20_F 159_H 0.80 0.00
33_V 20_L 0.80 0.00
66_Q 172_I 0.80 0.00
58_A 92_Q 0.80 0.00
33_V 148_L 0.79 0.00
26_V 3_R 0.79 0.00
9_N 29_E 0.79 0.00
39_S 158_R 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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