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OPENSEQ.org

CDSA - DXR
UniProt: P0ABG1 - P45568
Length: 683
Sequences: 920
Seq/Len: 1.39
I_Prob: 0.00

CDSA - Phosphatidate cytidylyltransferase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CDSA YNBB
DXR - 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DXR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
184_V 294_V 1.16 0.00
200_A 225_M 1.05 0.00
8_S 149_V 1.01 0.00
167_G 111_L 1.00 0.00
13_I 9_S 0.97 0.00
198_A 6_I 0.96 0.00
154_L 149_V 0.96 0.00
272_P 343_V 0.96 0.00
46_L 306_T 0.95 0.00
142_H 6_I 0.95 0.00
250_S 104_A 0.95 0.00
261_L 51_P 0.92 0.00
170_M 85_A 0.91 0.00
250_S 16_S 0.90 0.00
18_A 277_R 0.89 0.00
63_G 115_R 0.89 0.00
169_Y 198_L 0.88 0.00
54_Q 344_A 0.88 0.00
123_F 232_Y 0.85 0.00
41_W 84_A 0.85 0.00
168_A 305_L 0.85 0.00
60_V 44_E 0.84 0.00
260_I 136_M 0.83 0.00
30_I 374_C 0.83 0.00
237_T 36_G 0.83 0.00
127_T 207_C 0.83 0.00
199_T 351_I 0.83 0.00
168_A 216_R 0.83 0.00
43_W 154_N 0.82 0.00
240_M 220_V 0.82 0.00
241_F 299_F 0.81 0.00
221_L 71_Q 0.81 0.00
47_S 19_D 0.81 0.00
196_G 217_K 0.81 0.00
12_L 281_A 0.81 0.00
180_L 226_M 0.80 0.00
154_L 332_T 0.79 0.00
43_W 121_L 0.78 0.00
264_I 281_A 0.78 0.00
12_L 154_N 0.78 0.00
10_F 143_K 0.78 0.00
162_W 156_I 0.78 0.00
200_A 36_G 0.77 0.00
154_L 255_V 0.77 0.00
238_E 104_A 0.77 0.00
275_A 278_T 0.76 0.00
8_S 296_P 0.76 0.00
202_V 256_I 0.76 0.00
20_L 364_L 0.76 0.00
168_A 217_K 0.75 0.00
5_R 221_D 0.75 0.00
254_I 138_A 0.75 0.00
175_F 286_W 0.75 0.00
184_V 298_D 0.74 0.00
11_V 44_E 0.74 0.00
223_C 237_W 0.74 0.00
254_I 130_T 0.74 0.00
179_K 226_M 0.74 0.00
167_G 107_L 0.74 0.00
202_V 196_R 0.74 0.00
16_V 360_N 0.73 0.00
247_I 2_K 0.73 0.00
121_L 146_L 0.73 0.00
269_A 331_A 0.73 0.00
128_I 135_F 0.73 0.00
173_K 250_I 0.73 0.00
17_I 56_M 0.73 0.00
270_A 65_L 0.73 0.00
181_A 100_A 0.73 0.00
39_A 2_K 0.72 0.00
4_Y 250_I 0.72 0.00
250_S 221_D 0.72 0.00
10_F 376_D 0.72 0.00
129_V 296_P 0.71 0.00
241_F 304_A 0.71 0.00
180_L 266_S 0.71 0.00
34_V 20_V 0.71 0.00
34_V 174_E 0.71 0.00
208_G 146_L 0.71 0.00
238_E 345_A 0.71 0.00
43_W 266_S 0.70 0.00
105_F 225_M 0.70 0.00
12_L 225_M 0.70 0.00
236_L 356_I 0.70 0.00
179_K 289_R 0.70 0.00
164_A 226_M 0.70 0.00
180_L 183_L 0.70 0.00
251_G 21_V 0.70 0.00
22_L 146_L 0.70 0.00
187_G 142_S 0.69 0.00
177_K 205_Q 0.69 0.00
184_V 320_L 0.69 0.00
276_C 208_R 0.69 0.00
187_G 213_S 0.69 0.00
200_A 191_R 0.69 0.00
199_T 182_L 0.69 0.00
157_V 332_T 0.69 0.00
163_G 334_A 0.69 0.00
198_A 240_N 0.69 0.00
160_L 325_F 0.68 0.00
189_T 332_T 0.68 0.00
171_F 39_V 0.68 0.00
161_V 104_A 0.68 0.00
168_A 118_K 0.68 0.00
271_V 35_A 0.68 0.00
43_W 99_A 0.68 0.00
268_T 135_F 0.68 0.00
210_W 256_I 0.67 0.00
118_T 140_K 0.67 0.00
183_K 261_R 0.67 0.00
236_L 159_S 0.67 0.00
159_I 225_M 0.67 0.00
120_R 303_S 0.67 0.00
164_A 97_V 0.67 0.00
175_F 376_D 0.67 0.00
193_F 119_T 0.67 0.00
38_L 369_M 0.66 0.00
20_L 335_L 0.66 0.00
167_G 213_S 0.66 0.00
198_A 255_V 0.66 0.00
5_R 217_K 0.66 0.00
190_W 39_V 0.66 0.00
126_L 213_S 0.66 0.00
208_G 91_L 0.66 0.00
264_I 105_A 0.66 0.00
222_I 383_A 0.66 0.00
28_F 28_F 0.66 0.00
139_R 272_G 0.65 0.00
267_L 156_I 0.65 0.00
53_S 208_R 0.65 0.00
126_L 180_S 0.65 0.00
38_L 21_V 0.65 0.00
31_V 388_V 0.65 0.00
241_F 296_P 0.65 0.00
132_F 121_L 0.65 0.00
226_V 17_T 0.65 0.00
38_L 105_A 0.65 0.00
231_S 294_V 0.64 0.00
268_T 56_M 0.64 0.00
89_L 315_Y 0.64 0.00
238_E 389_A 0.64 0.00
266_S 198_L 0.64 0.00
254_I 290_V 0.64 0.00
268_T 241_A 0.64 0.00
206_G 256_I 0.64 0.00
267_L 138_A 0.64 0.00
41_W 203_P 0.64 0.00
166_S 295_K 0.64 0.00
253_L 247_E 0.64 0.00
156_Y 332_T 0.64 0.00
222_I 40_T 0.64 0.00
13_I 243_A 0.64 0.00
268_T 262_Y 0.63 0.00
275_A 154_N 0.63 0.00
210_W 353_F 0.63 0.00
225_I 295_K 0.63 0.00
268_T 185_G 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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