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ATPB - ATPG
UniProt: P0ABB4 - P0ABA6
Length: 747
Sequences: 1203
Seq/Len: 1.61
I_Prob: 0.00
ATPB - ATP synthase subunit beta
Paralog alert: 0.63 [within 20: 0.35] - ratio of genomes with paralogs
Cluster includes: ATPA ATPB FLII 		ATPG - ATP synthase gamma chain
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2ck3DEF:ABC:GContact Map
2qe7ABC:GContact Map
3oaaASaKYZJBIQCR:GeWOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
385_E 128_S 1.12 0.00
422_K 224_V 1.10 0.00
47_L 163_G 0.92 0.00
10_I 235_N 0.91 0.00
398_Q 19_K 0.90 0.00
423_D 37_D 0.89 0.00
314_A 36_Q 0.89 0.00
357_T 198_D 0.89 0.00
223_T 177_N 0.86 0.00
385_E 115_L 0.85 0.00
224_G 165_L 0.85 0.00
57_M 168_L 0.85 0.00
304_L 14_V 0.85 0.00
438_H 117_M 0.84 0.00
141_A 29_A 0.84 0.00
318_A 254_G 0.83 0.00
381_D 267_K 0.83 0.00
321_V 14_V 0.82 0.00
318_A 42_S 0.81 0.00
357_T 284_A 0.81 0.00
350_V 97_K 0.80 0.00
423_D 105_T 0.80 0.00
89_M 91_L 0.80 0.00
161_M 88_C 0.80 0.00
47_L 235_N 0.79 0.00
120_L 248_K 0.78 0.00
9_V 139_G 0.78 0.00
167_I 176_I 0.78 0.00
235_G 231_G 0.78 0.00
123_S 98_K 0.77 0.00
352_Q 122_G 0.77 0.00
5_K 191_L 0.77 0.00
120_L 79_L 0.76 0.00
54_T 212_P 0.76 0.00
57_M 52_V 0.75 0.00
262_M 281_V 0.75 0.00
396_K 281_V 0.75 0.00
367_R 29_A 0.74 0.00
112_R 25_E 0.74 0.00
196_D 200_K 0.74 0.00
28_D 272_S 0.74 0.00
215_G 267_K 0.74 0.00
325_Q 153_V 0.73 0.00
454_V 71_R 0.73 0.00
360_G 56_L 0.73 0.00
207_Y 95_L 0.72 0.00
381_D 90_G 0.72 0.00
297_V 132_N 0.72 0.00
96_V 28_A 0.72 0.00
323_S 122_G 0.71 0.00
341_T 282_S 0.71 0.00
304_L 149_L 0.71 0.00
343_R 94_N 0.71 0.00
16_V 277_L 0.70 0.00
7_V 170_I 0.70 0.00
386_E 104_K 0.70 0.00
160_M 39_M 0.70 0.00
234_E 206_Y 0.70 0.00
203_V 173_N 0.70 0.00
127_L 277_L 0.70 0.00
167_I 183_P 0.70 0.00
23_V 93_I 0.70 0.00
433_E 152_P 0.70 0.00
320_V 267_K 0.69 0.00
453_A 3_G 0.69 0.00
294_V 4_A 0.69 0.00
137_M 207_L 0.69 0.00
55_I 73_V 0.69 0.00
159_N 271_A 0.69 0.00
213_P 242_A 0.69 0.00
349_V 198_D 0.69 0.00
370_E 121_K 0.69 0.00
26_V 214_A 0.69 0.00
446_M 157_L 0.68 0.00
218_L 173_N 0.68 0.00
120_L 49_M 0.68 0.00
169_I 14_V 0.68 0.00
218_L 230_Q 0.68 0.00
49_G 192_P 0.68 0.00
98_M 228_V 0.68 0.00
412_T 85_R 0.68 0.00
294_V 224_V 0.67 0.00
26_V 248_K 0.67 0.00
257_A 87_L 0.67 0.00
200_I 143_N 0.67 0.00
89_M 235_N 0.67 0.00
178_A 52_V 0.67 0.00
449_S 60_N 0.67 0.00
134_I 148_E 0.67 0.00
369_Q 160_Y 0.67 0.00
223_T 12_A 0.67 0.00
90_N 258_I 0.67 0.00
422_K 8_R 0.67 0.00
370_E 81_V 0.66 0.00
370_E 22_K 0.66 0.00
55_I 259_K 0.66 0.00
383_L 86_G 0.66 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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