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OPENSEQ.org

ATPD - ATPE
UniProt: P0ABA4 - P0A6E6
Length: 316
Sequences: 962
Seq/Len: 3.06
I_Prob: 0.21

ATPD - ATP synthase subunit delta
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPD
ATPE - ATP synthase epsilon chain
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_V 23_K 1.26 0.21
147_V 131_V 1.24 0.20
118_S 53_I 1.11 0.14
32_L 47_K 1.06 0.12
89_L 44_T 1.04 0.11
23_Q 107_S 1.01 0.10
121_Q 81_A 0.97 0.09
121_Q 11_S 0.96 0.08
177_S 55_K 0.93 0.07
41_N 54_V 0.92 0.07
37_E 9_V 0.92 0.07
70_D 17_F 0.89 0.07
42_E 59_H 0.87 0.06
125_I 32_E 0.87 0.06
142_K 72_V 0.86 0.06
16_F 34_G 0.85 0.06
128_A 87_G 0.85 0.06
16_F 66_S 0.85 0.06
143_I 87_G 0.84 0.05
135_R 106_I 0.83 0.05
19_A 81_A 0.83 0.05
77_I 120_A 0.83 0.05
177_S 56_Q 0.83 0.05
64_V 25_Q 0.82 0.05
164_V 52_R 0.82 0.05
143_I 84_A 0.82 0.05
23_Q 97_E 0.81 0.05
41_N 60_E 0.81 0.05
102_V 79_V 0.81 0.05
15_A 32_E 0.81 0.05
113_S 99_K 0.80 0.05
6_T 70_L 0.80 0.05
172_A 5_Y 0.80 0.04
52_L 43_L 0.80 0.04
99_L 72_V 0.80 0.04
173_D 28_G 0.80 0.04
59_E 100_R 0.79 0.04
146_S 35_I 0.79 0.04
175_L 97_E 0.79 0.04
113_S 49_G 0.78 0.04
155_A 80_L 0.77 0.04
121_Q 37_P 0.77 0.04
139_L 16_M 0.77 0.04
163_S 71_E 0.77 0.04
12_A 80_L 0.77 0.04
6_T 51_I 0.77 0.04
91_D 79_V 0.76 0.04
50_G 28_G 0.76 0.04
68_Q 35_I 0.76 0.04
98_H 90_L 0.76 0.04
86_L 49_G 0.76 0.04
175_L 73_Q 0.75 0.04
145_K 9_V 0.75 0.04
49_S 65_L 0.75 0.04
96_F 129_L 0.74 0.04
15_A 27_T 0.74 0.04
168_L 10_V 0.74 0.04
52_L 4_T 0.74 0.04
175_L 112_D 0.74 0.04
89_L 120_A 0.74 0.04
77_I 5_Y 0.73 0.04
28_W 86_R 0.73 0.03
42_E 97_E 0.72 0.03
173_D 130_R 0.72 0.03
157_D 114_D 0.72 0.03
25_V 61_E 0.72 0.03
122_L 58_G 0.72 0.03
112_I 81_A 0.71 0.03
167_R 5_Y 0.71 0.03
157_D 98_A 0.71 0.03
139_L 46_I 0.71 0.03
2_S 117_Q 0.71 0.03
124_K 47_K 0.70 0.03
14_A 71_E 0.70 0.03
10_P 11_S 0.70 0.03
149_A 121_E 0.70 0.03
141_C 11_S 0.70 0.03
147_V 4_T 0.70 0.03
147_V 5_Y 0.69 0.03
17_D 116_A 0.69 0.03
105_A 119_S 0.69 0.03
19_A 93_A 0.69 0.03
31_M 64_Y 0.69 0.03
14_A 41_P 0.69 0.03
27_R 97_E 0.69 0.03
131_K 112_D 0.69 0.03
174_V 41_P 0.69 0.03
116_A 51_I 0.69 0.03
111_V 115_Y 0.68 0.03
73_G 26_V 0.68 0.03
32_L 10_V 0.68 0.03
61_F 104_E 0.68 0.03
16_F 99_K 0.68 0.03
96_F 40_A 0.68 0.03
53_A 129_L 0.67 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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